Limosilactobacillus reuteri SD2112: HMPREF0538_21228
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Entry
HMPREF0538_21228 CDS
T01551
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
lru
Limosilactobacillus reuteri SD2112
Pathway
lru00220
Arginine biosynthesis
lru00240
Pyrimidine metabolism
lru00250
Alanine, aspartate and glutamate metabolism
lru01100
Metabolic pathways
lru01110
Biosynthesis of secondary metabolites
lru01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HMPREF0538_21228 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HMPREF0538_21228 (carB)
00220 Arginine biosynthesis
HMPREF0538_21228 (carB)
Enzymes [BR:
lru01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
HMPREF0538_21228 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp
ATPgrasp_Ter
MGS
GARS_A
ATP-grasp_5
Jag_N
Motif
Other DBs
NCBI-ProteinID:
AEI57438
UniProt:
F8DRG0
LinkDB
All DBs
Position
complement(1221376..1224546)
Genome browser
AA seq
1056 aa
AA seq
DB search
MPKRTDIHKILVIGSGPIIIGQAAEFDYSGTQACLALREEGYETILVNSNPATIMTDKEI
ADHVYIEPLTVDSLSRIIRQEYPDAILPTLGGQIGLNLAVSLSKTGLLDELGIELLGTKL
DSIDEAEDREKFKELMNELGEPVPASQTVNTVDEAVEFAHQCGYPVIVRPAFTMGGTGGG
ICHNDAEMRTVAKNGLELSPVTQCLIEKSIAGYKEIEFEVMRDSADNVMVVCCMENFDPV
GIHTGDSIVFAPNQTLSDREYQMLRDCALKLIRALKIEGGCNVQLALDPQSFQYNVIEVN
PRVSRSSALASKATGYPIAKMAAKIAVGLTLDEIKNPVTKTTFAEFEPALDYVVCKIPRW
PFDKFTQADRHLGSQMKATGEVMAIGRTVEEALHKAVRSLEIDEKDLFSAEAHHAPTDML
EKKLRYPQDDRLFYLAEAFRRGYSLKQTHDLTKISPYFLDIVKHLVELEDDLSTKPFDAE
TLIISKKYGFSDATIARLWHTSSQEVRKFRKQNEILPVYKMIDTCAAEFASSTPYFYSAY
DHENESQRTKKPSILVLGSGPIRIGQGVEFDYATVHSVKAIQRAGYEAIVINSNPETVST
DFSVSDKLYFEPLTLEDVLNVIDLEQPVGVIVQFGGQTAINLAEGLAKNGVNILGTTVDD
LDAAEDREVFDKVITDLNLKQPIGLTATTHSAVIKAAEKIGYPVLVRPSYVLGGKAMETV
YNQEELQQYLQQNASITADHPILIDAYLEGRECEVDAICDGKDVLIPGIMEHIEHAGVHS
GDSMAVYPPQHFDDDIKQQIVTATEKLAVALKCIGIMNIQFIVHNREVYILEVNPRASRT
VPFLSKITGIEMAQVATRVILGQSLADQGFTNGLYPEPQTIHVKAPVFSFNKLANVDSYL
SPEMKSTGEVMGTDTTYEKALHKAFSGAHVQVPNNGKILFTIENGDEEDILPLAKRFAQI
GYQIFTTPQTASHFKDNGIHVHQKISNIDELNRLLKAGQIDLVINTMRHDYEQDSLGFQI
RQSTIAQNVPLMTSLDTVNALLHVKEDQCLEAITIK
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgaactgatattcataaaattctcgtcatcggatctggtcctattattatt
ggccaagcagctgaatttgattattccggcacgcaggcttgtcttgccctccgcgaagaa
ggatacgaaaccatccttgttaattctaatccagcaacaatcatgactgataaggaaatt
gctgatcatgtctacatcgaaccattaacggttgactccctctctcgaattatccgtcaa
gaatatcctgatgcaattttaccaacccttggcggacaaatcggcctcaacttagctgtc
tccttatctaaaactggtctcctcgacgaattaggaattgaacttctcggaactaagctg
gattcgattgatgaagcagaagaccgcgaaaaattcaaggaattaatgaatgagcttggt
gaacctgttccggcttcacagacagttaatactgttgatgaagcagtcgaattcgcacac
caatgcggatatccagtaatcgtccgtcccgcctttactatgggtggtacaggtggcggg
atctgccataatgatgcagaaatgcgtactgttgccaagaatggcttggaattatcccct
gtcacccaatgtttaattgaaaagtcaatcgcgggctataaggaaatcgagtttgaagta
atgcgggattcagctgacaatgtaatggtcgtttgttgtatggaaaactttgacccagtg
ggaattcataccggtgactccattgtatttgcccctaatcagacccttagcgaccgcgaa
tatcagatgctccgtgattgcgcgctcaagctgatccgtgccctcaaaatcgaaggagga
tgtaacgtccaactagctcttgatccgcaaagtttccagtataacgttatcgaagttaat
ccgcgggtttcccgttcatctgcccttgcttccaaggcaactggttatccaatcgctaaa
atggctgctaaaattgcggttggccttaccctcgatgaaattaagaatcccgttaccaag
acaacttttgctgaatttgaaccggcacttgactatgttgtctgcaaaattccccgctgg
ccgtttgataagtttactcaggctgatcgacacctgggcagccagatgaaagccacggga
gaagtaatggcaattggtcggacagttgaggaagctctccataaggctgttcgttcactc
gaaattgatgaaaaagacctcttttcagcagaagctcatcatgcgccaacagacatgctt
gaaaagaagttacgttatccccaagatgatcggttattttatttagcagaagcatttcgg
cgtggatattcccttaagcaaactcatgacttaactaagatttccccctatttcctcgat
atcgtcaaacacttggtggaacttgaagacgatcttagtaccaagccatttgatgcagaa
acactgataatcagcaaaaaatatggctttagcgatgcaacaattgcccgcctttggcat
acttcctcacaagaagttcggaaattccgaaaacagaatgaaattctccccgtatataag
atgatcgatacctgtgctgctgaatttgcttcttcaaccccttatttctacagcgcatat
gaccatgaaaatgaaagccaacggacaaagaagccatctatccttgtccttggttcaggg
ccaatccggatcggtcaaggagttgagtttgactatgcgaccgttcatagcgttaaggca
attcaacgggctggttatgaagcaattgtcatcaattcgaatccagaaactgtttcgaca
gatttctcggtctcagataaactctatttcgagcccctcacgcttgaagatgtcctaaac
gtgattgatctcgaacaaccagtaggcgtgatcgtgcaatttggtggacaaacagcgatt
aatttagcagaaggtcttgctaaaaatggagttaatattcttggaacaaccgttgacgac
cttgatgccgctgaagatcgagaagtattcgataaagttatcactgatctaaatcttaag
cagccaatcggtttaaccgcaactactcactctgccgttatcaaagcggctgaaaaaatc
ggctatcccgttcttgttcgtccaagttatgttctcggtggtaaggccatggagactgtt
tataatcaagaagaactgcaacaataccttcaacaaaacgcctccattactgctgatcac
cctattttaatcgatgcctaccttgaaggacgggaatgtgaagtagacgcaatttgcgat
ggaaaagacgtccttatccctggaattatggaacatattgaacatgcgggcgttcactcg
ggagattcaatggcagtttatcccccacaacattttgatgatgacattaaacaacaaatc
gttactgctaccgaaaaattagcagttgctcttaaatgtattggcatcatgaacatccaa
tttattgttcataatcgcgaagtgtacatccttgaagttaatccgcgagctagtcgaaca
gtgccattcctcagcaagattacgggaatcgaaatggcccaagttgctaccagagttatc
cttggccagtcacttgctgatcagggttttactaacggtctttatccagaaccacaaacc
attcatgttaaagctcctgtctttagctttaacaagttagcgaacgttgattcttatctc
agtccagaaatgaaatcgacaggcgaagtgatggggacagataccacctatgaaaaagca
cttcataaagccttttctggagcacacgttcaagtccctaacaatggcaaaattctcttt
acgattgaaaatggggatgaagaagacattctcccactagcaaaacggtttgctcagatt
ggctaccaaattttcactaccccacaaacagcatcgcactttaaggataacggcattcac
gtccatcaaaaaatatctaacattgatgaactcaaccgactcttaaaagccgggcaaatc
gatcttgttatcaacactatgcgccatgattatgaacaagattcacttggctttcagatc
cgccaaagtacaatcgcgcaaaatgttcccctcatgacttcacttgatacagtcaatgcg
ttgctgcacgtcaaagaagatcaatgtttggaagccatcacaattaaatag
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