Limosilactobacillus reuteri SD2112: HMPREF0538_21534
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Entry
HMPREF0538_21534 CDS
T01551
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lru
Limosilactobacillus reuteri SD2112
Pathway
lru03030
DNA replication
lru03430
Mismatch repair
lru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0538_21534 (dnaX)
03430 Mismatch repair
HMPREF0538_21534 (dnaX)
03440 Homologous recombination
HMPREF0538_21534 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lru03032
]
HMPREF0538_21534 (dnaX)
03400 DNA repair and recombination proteins [BR:
lru03400
]
HMPREF0538_21534 (dnaX)
Enzymes [BR:
lru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0538_21534 (dnaX)
DNA replication proteins [BR:
lru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0538_21534 (dnaX)
DNA repair and recombination proteins [BR:
lru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0538_21534 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_30
AAA_5
AAA_22
TIP49
AAA_19
AAA_24
AAA_assoc_2
ZapB
AAA_14
AAA_7
VPS51_Exo84_N
AAA_16
AAA_2
LETM1_RBD
DivIC
SCIMP
Mg_chelatase
RNA_helicase
DUF4466
AAA_18
CCDC92
Allexi_40kDa
DUF3573
DUF5660
Motif
Other DBs
NCBI-ProteinID:
AEI57743
UniProt:
F8DLR4
LinkDB
All DBs
Position
1555521..1557356
Genome browser
AA seq
611 aa
AA seq
DB search
MSYQALYRVWRPQRFDDLVGQQIVTRTLKNAIITHQISHAYLFAGPRGTGKTSAAKIFAK
AVNCHHSKDGEPCNECEICKAITNGQLNDVIEIDAASNNGVEEIRDIRDKAKYAPTQADY
KVYIIDEVHMLSTGAFNALLKTLEEPPANVIFILATTEPHKIPLTIISRVQRFDFRRISA
EDAFNRMKYILDQKEVTYDEKALWVIANAAEGGMRDALSILDQVLSFSDNEVKLDDALLV
TGSVTKQLLKKYFLEISKHEGATALDTMKDILDEGKDGQRFIEDLISFIRDILLYQESPS
LISVESTGLKQEDFEEIVQLASSATLYQMIDELNNIQEEMRFTTHPDVYLEVLTIKLAQI
EPQKNIQSAPAVSSDTNTEATKTIEKLQQEIQQLQQTVKQLQNVPAKASRPSPRQQNEQP
RVQQKKVQVNLNKIYPVLENATRQDLINVRELWGDMLNLLSVPQRSLLHVSQPVAASAVG
IIVAFDYPFLFQQAADDTTLLENMESALQRLTGNERQVVFVPKDKWPKIRQDFIKDHGFG
KNQQKSQPIKQKPQTTEESGQTHAATPAPMEEPPLPPEDETLTEEKSPQEDNQVATAQKL
FGSDIVKVEDN
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggcattatatcgtgtctggcgaccacagcgattcgatgatcttgtcggt
caacagattgttacaagaaccctaaaaaacgccattatcactcaccagataagccatgca
tacttgttcgctggtccacgtggtactggtaaaacctcagcagcaaaaatttttgctaaa
gcggttaattgtcatcattccaaggatggcgaaccttgtaatgagtgtgagatttgtaaa
gcaattacaaacgggcaattaaatgatgtaattgaaatcgatgcggcttctaataatggg
gttgaagagattcgtgatattcgggataaggcaaaatatgctcctacccaagcggactac
aaagtttatataattgatgaagttcacatgctttcaacaggggcttttaacgcactgcta
aaaacgcttgaagaaccaccagccaatgtgatttttattcttgcaactacagaaccgcat
aaaattcctttaacaattatttcgcgggttcaacgatttgattttcgacgaatttcagca
gaagatgcatttaatcgaatgaaatatattcttgatcaaaaggaagttacttatgatgag
aaagcattatgggtaattgcaaatgccgctgaaggaggaatgcgggatgcgttgagtatc
cttgaccaggttctttctttcagtgataatgaggtaaagttggatgatgctttactagtt
acaggaagtgttactaaacaattattaaaaaagtactttttggagattagtaagcatgaa
ggggcgactgctcttgacaccatgaaagatattttggatgaaggaaaagatggtcagcgg
ttcatcgaggacttgatttcctttattcgtgatattctgttataccaagaatcaccaagc
ttgattagtgttgaaagtacgggactaaagcaggaagactttgaagaaatagtccaactt
gcttcttcagcgaccttataccaaatgatcgatgaactaaataatattcaagaagagatg
cgttttacgacccatccggatgtgtatttggaagttcttacaataaaacttgcacaaatc
gaaccacaaaagaatattcaatcggcaccagcggtttcttcggatacaaatactgaagct
actaagacgattgaaaaattacaacaagagatacagcaattgcaacaaacagtaaaacag
ttgcagaatgtgccggcaaaggctagtcgaccatcacctcggcaacaaaatgagcaacca
cgagtacaacaaaagaaagtgcaggttaatctcaataagatttacccagtgttagaaaat
gcgactcgtcaagatttaataaatgttcgtgagctatggggagatatgttgaatctattg
tcggtgccgcaacggtccttacttcacgtttcacaaccggttgccgctagtgccgtggga
ataattgttgcttttgattatccgttcttattccaacaagcagctgatgatacaacgttg
ttagagaatatggaaagtgctctgcaacgtttaactggaaatgaacggcaagttgttttt
gtacctaaggataaatggccaaaaattcggcaagactttatcaaggatcatggttttggt
aagaatcagcaaaagtcgcaacctattaaacaaaagccgcaaactactgaagaaagcgga
caaactcatgcagctacaccagcaccgatggaggaaccaccgctaccaccagaagatgag
acactaactgaagaaaagtcacctcaagaagataaccaagtagcaacagcacagaagtta
tttggtagtgatattgttaaagtagaagataattaa
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