Limosilactobacillus reuteri SD2112: HMPREF0538_21617
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Entry
HMPREF0538_21617 CDS
T01551
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lru
Limosilactobacillus reuteri SD2112
Pathway
lru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HMPREF0538_21617 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lru03400
]
HMPREF0538_21617 (ung)
Enzymes [BR:
lru01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HMPREF0538_21617 (ung)
DNA repair and recombination proteins [BR:
lru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HMPREF0538_21617 (ung)
Prokaryotic type
HMPREF0538_21617 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
AEI57826
UniProt:
F8DM77
LinkDB
All DBs
Position
1639307..1640041
Genome browser
AA seq
244 aa
AA seq
DB search
MMFNYAKIIGEVLIIVKQLIHNDWWEVLKPQFESAYYAQLHNFLKEEYTHQTIYPEMHHI
FEAFEWTPFSKVKVVILGQDPYHGPNQAHGCSFSVLPGVPVPPSLQNIYKELQSDLGCIP
VNHGYLKKWADQGVLLLNSVLTVRAGQAYSHRGHGWEQLTDAAIHALSERPKPVVFILWG
RAARNKKQLINTKTNIVLESAHPSPLSANRGFFGSRPFSKTNEALQAMGEQPIDWQLPAK
PNYR
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttaattatgctaaaataataggcgaggtgctaataatcgtgaaacaattaatt
cataacgactggtgggaagttttaaagccccagtttgaaagtgcatattatgcgcaattg
cataatttcctaaaagaagaatatacccatcaaacgatctatccagaaatgcatcatatt
ttcgaagcatttgaatggactccttttagtaaggttaaagttgttatccttggtcaagat
ccttatcatggaccaaaccaagctcatgggtgtagtttttcagtactgcctggggtgccg
gtcccgccttcattacagaatatttacaaagaattgcaaagtgatttaggttgtataccg
gtaaatcacggctatttaaagaagtgggctgatcaaggcgtcctgttattaaattcggtt
ttgacagtgcgagcagggcaagcatattctcaccgtggacatggctgggaacaattaaca
gatgcagcgattcatgctttatctgaacgtcctaaaccagttgtgttcatcttatgggga
cgggctgctcgaaataagaaacagttaattaatacgaagacaaatatcgttcttgaatca
gctcacccgagtccattatctgctaaccgtggattctttgggtctcgaccattttctaaa
acaaacgaagcacttcaggcaatgggagaacagccaattgattggcaactgcctgccaaa
ccaaattatcgttaa
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