Limosilactobacillus reuteri SD2112: HMPREF0538_21832
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Entry
HMPREF0538_21832 CDS
T01551
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
lru
Limosilactobacillus reuteri SD2112
Pathway
lru00470
D-Amino acid metabolism
lru00550
Peptidoglycan biosynthesis
lru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMPREF0538_21832 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMPREF0538_21832 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lru01011
]
HMPREF0538_21832 (murD)
Enzymes [BR:
lru01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HMPREF0538_21832 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
lru01011
]
Precursor biosynthesis
Amino acid ligase
HMPREF0538_21832 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
Pyr_redox
Pyr_redox_3
2-Hacid_dh_C
Pyr_redox_2
ELFV_dehydrog
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AEI58041
UniProt:
F8DNH9
LinkDB
All DBs
Position
1866476..1867846
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AA seq
456 aa
AA seq
DB search
MKKIDEYQGKKVLVMGFGISGINAAHLLVKLGANVTANDKATPKNNDIVDDLKADGIKVI
TGDNPISLANEGFDVVVKNPGIPYDNPLVAAFVKQGTPIITEAELGWQIFDGHLVSVTGS
NGKTTTTTLTQLMIAENAKYQVKYAGNIGISFSKIAEDLGPDDTLVTELSSFQLLGAPTI
HPHIAIITNIFSNHLDYHKTRENYINAKLNITRNQTKDDFLVINWDRDEWQKIAQRSQAT
IVPFSRLNKSHEGSYVEDGMIYWRGQEVMPTKDIRLIGPQNVENALAAIAAAKLSGVTND
AIKKVLTTFSGVRHRLQYVMEYQERLFYNDSKSTDIEATEVALQGFDRPVVLLAGGLDRG
YTFERLVPYFKKHVKAMIVFGECKDKMKDAGNQAGVPVIESENAITAVPEAWKLSEPGDV
ILLSPANASWDQFPSFEVRGDKFIEAVEKLTGKKEQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagattgatgaatatcaaggtaaaaaagttcttgtaatgggtttcggaattagt
ggcattaatgcggctcacttattggtaaaacttggtgccaatgttaccgctaatgataaa
gcaactcctaaaaataatgatattgttgatgatttaaaagctgatggaatcaaggtaatt
actggtgataatcccatttcattagctaatgaaggtttcgatgttgtagtaaaaaatcct
ggaattccttatgataatccattagtggctgcattcgttaagcaggggacacctattatt
acggaagcagaactaggatggcaaatttttgatggtcaccttgtaagtgtaactggaagt
aatgggaagactaccacaacgactttaactcaactaatgattgctgaaaatgcaaaatat
caagtgaaatatgcaggtaatattggaatttcctttagtaaaattgctgaggatttaggg
ccagacgatacattggtcacggaattatctagtttccaattattaggagcaccaacaatt
catccgcatattgcaattattactaacattttttctaatcatttagactatcataagaca
cgagaaaactatattaatgcaaagcttaatattacccggaaccaaaccaaggatgatttc
ttagttattaactgggatcgtgatgaatggcaaaagattgctcagcgtagtcaagctacc
attgtgccattttctcgtctcaataagagtcatgaaggatcttatgtagaagatggaatg
atttactggcgtggacaagaggttatgccaaccaaagatattcgattgatcggtccacaa
aatgtagaaaatgcattggcagcaattgcagcggcaaaattaagcggtgttacaaatgat
gcaataaagaaagttttaacaacatttagtggagtccgtcaccgcttacaatatgtgatg
gaataccaagaacggcttttctacaatgattcaaaatcaactgatattgaagctactgaa
gttgctttgcaaggctttgatcgtccagtagttcttttggcgggtggccttgatcgtggt
tatacctttgaacggttggttccttactttaagaagcatgtcaaggcaatgattgttttt
ggtgaatgtaaagataaaatgaaggatgcggggaatcaagctggagttccagtaattgaa
agtgaaaatgcaattactgcggtaccagaagcatggaagctgagtgaaccaggagatgtc
attctcctctcgcctgctaatgctagttgggaccaattcccaagctttgaagttcgtggt
gataaatttattgaagcagttgaaaaattaacaggaaagaaggaacaataa
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