Limosilactobacillus reuteri SD2112: HMPREF0538_21848
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Entry
HMPREF0538_21848 CDS
T01551
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
lru
Limosilactobacillus reuteri SD2112
Pathway
lru04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
HMPREF0538_21848 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lru03016
]
HMPREF0538_21848 (trmU)
Enzymes [BR:
lru01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
HMPREF0538_21848 (trmU)
Transfer RNA biogenesis [BR:
lru03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
HMPREF0538_21848 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
ThiI
ATP_bind_3
DUF7411
QueC
Arginosuc_synth
Asn_synthase
PAPS_reduct
gp37_trimer
Motif
Other DBs
NCBI-ProteinID:
AEI58057
UniProt:
F8DNJ5
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All DBs
Position
1881479..1882612
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AA seq
377 aa
AA seq
DB search
MADNSHTRVVVGMSGGVDSSVTALLLKRQGYDVVGVFMKNWDDTDENGVCTATEDYKDVA
KVASKIGIPYYSVNFEKEYWDRVFKYFIAEYKKGRTPNPDVICNKEIKFKAFIEYANQLG
ADYVATGHYADVKRDENGRMHLMRAKDQHKDQTYFLSQLDYKQLDKVMFPLAGYTKPEIR
KIAEEAGLATADKKDSVGICFIGEDGHFREFLSQYIPAQPGNMETLDGKVVGQHMGLMYY
TIGQRRGLGLGGNKESNEPWFVIGKDMKKNVLYVGQGYENSHLYATHLEASDIHWVDDVV
SRYGRDFHCTAKFRYRQTDVGVTVHLSEDDQMVTVEFDDPARAITPGQAVVFYDGEECLG
SAIIDRAYSHDRQLQYV
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggctgataatagtcatacacgtgtggtggtaggaatgagtggaggagtcgactcttca
gtgacggctcttctcttgaaacgtcaaggatacgatgttgttggtgtcttcatgaaaaac
tgggatgacactgatgaaaatggtgtttgtactgccactgaagactacaaagatgtagca
aaagttgcttctaagattgggattccatactattctgttaactttgagaaggaatactgg
gatcgggttttcaagtatttcattgctgagtacaagaaaggtcgtacaccaaatcctgat
gttatttgtaataaagagatcaagttcaaggcttttattgaatatgctaaccaattaggt
gctgattacgttgctactggacactatgctgatgtaaagcgtgatgagaacggccggatg
cacttgatgcgtgctaaagaccaacacaaggatcaaacttacttcttaagtcaacttgat
tataagcagttggataaggtaatgtttccattagctggctacactaagccagaaatcaga
aagattgctgaagaagcagggcttgctactgctgataagaaggattctgttggaatttgc
tttatcggtgaggatggtcattttcgtgaattcttgagtcaatatattccagcacaacca
gggaatatggagacccttgatggtaaggtcgttggtcagcatatgggcttaatgtattac
accattggtcagcgtcgtgggcttggccttggtggtaataaggaaagtaatgagccatgg
tttgtaatcggtaaggatatgaagaagaacgttctttatgttggtcaaggatacgaaaac
agccatctttatgctactcatcttgaagcgagtgatatccactgggttgatgatgttgta
agtcgttatgggcgtgattttcattgtacggccaagttccgttaccgtcagacagatgtt
ggcgttactgttcatttgtcagaggatgatcaaatggtaacagttgaatttgatgatcct
gcacgggccatcactccaggtcaagcggttgtcttttacgatggagaggaatgccttggg
agcgcgattattgatcgtgcttacagtcatgaccggcagcttcaatacgtttga
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