Limosilactobacillus reuteri SD2112: HMPREF0538_21907
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Entry
HMPREF0538_21907 CDS
T01551
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lru
Limosilactobacillus reuteri SD2112
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lru03016
]
HMPREF0538_21907 (rnz)
Enzymes [BR:
lru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
HMPREF0538_21907 (rnz)
Transfer RNA biogenesis [BR:
lru03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HMPREF0538_21907 (rnz)
Prokaryotic type
HMPREF0538_21907 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Anti-Pycsar_Apyc1
HECW_N
Motif
Other DBs
NCBI-ProteinID:
AEI58114
UniProt:
F8DNX8
LinkDB
All DBs
Position
1944855..1945784
Genome browser
AA seq
309 aa
AA seq
DB search
MQLEFLGTGAGSPSKQRNVASVALRLLEERNAIWLFDVGEATQHQILNTTIRPRKIEKIF
ITHLHGDHIFGLPGLLSSRSFQGGTEPLTIYGPIGIKRYVQTSLQVSESRLSYPLHFVEI
TDDGELFNDHGFRVIARKLDHKIACFGYRIEEADHPGELQVEKLREQKVPSGPIYGQLKA
GKTVTLPDGRVLDGHDFIGTPQPGRIIAILGDTRQTKNAILLAQNADVLVHESTFAKDET
KMAYNYYHSTSKQAAEIAKKAGVKKLLLNHISARYTGKAAYQLAYQVRNIIPDTRVVNDF
DVIDIPFKK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttgaatttttaggaacaggcgctggttccccaagtaagcaacgtaatgtagca
agtgttgcattgcggttgttagaagaacgaaacgcaatttggttatttgatgttggagaa
gctactcaacatcaaattctcaatacgacaattaggccacgaaagatagaaaaaatcttt
attactcacttgcatggtgatcatatctttggtttacctggtttactaagttcccgctct
tttcaaggaggaaccgaaccattgacgatctatggaccaataggaataaagcggtatgtt
cagacttctttgcaagtaagtgagtcacgcctcagttatcctttgcattttgttgaaata
acagatgacggggaactatttaatgatcatggttttagagtgattgcacgaaagttggat
cacaaaattgcttgttttggataccggattgaagaagcggatcatccaggagaattacaa
gttgaaaaattacgagaacaaaaagtaccatctgggccaatttacggtcaactaaaagct
ggaaaaacggttactcttcctgatggtcgcgtattagatggtcatgactttattggcact
cctcaacctggacgaattattgcaattttaggcgatactagacaaacaaagaatgcaatt
ttgttagcacaaaatgcggatgtattagtgcatgaaagtacttttgctaaagatgagacg
aagatggcatacaattattatcattcaaccagcaaacaagcagctgaaattgcaaaaaaa
gctggtgttaaaaaattattgttaaatcatatttcagcacgatacaccggtaaagcagcc
tatcaattggcatatcaagttcgtaatattattcctgatactcgagttgttaatgatttt
gatgtgattgatattccgttcaaaaaatga
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