KEGG   Limosilactobacillus reuteri SD2112: HMPREF0538_21954
Entry
HMPREF0538_21954  CDS       T01551                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
lru  Limosilactobacillus reuteri SD2112
Brite
KEGG Orthology (KO) [BR:lru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lru03016]
    HMPREF0538_21954 (truB)
Enzymes [BR:lru01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     HMPREF0538_21954 (truB)
Transfer RNA biogenesis [BR:lru03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    HMPREF0538_21954 (truB)
 Prokaryotic type
    HMPREF0538_21954 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: AEI58161
UniProt: F8DP25
LinkDB
Position
1989675..1990580
AA seq 301 aa
MDGIIPLYKERGMTSFACVSRLRQILKTKKIGHSGTLDPGVAGVLPICVGNATKVVDYLM
QSGKQYQGELLIGFATTTQDLDGEKIEDKEVTNEIPTSEILSAMNSLTGTIIQIPPMYSA
VKVNGKKLYEYARAGETVERPKRQVTISKFKLLSSKYDEENKQQRIRFNVECSKGTYIRT
LVVDLARKLGYPGVMSLLTRLKSGGFTLDQTLSLDNVRDAVATQTLQQYLYPLDYALKDY
PQLTIQEAQWKKVQNGGWLSPSELNTSEKEIVLSFDGQVKALYHFDPKNKMYKPTKMFAV
N
NT seq 906 nt   +upstreamnt  +downstreamnt
atggatggaataatacccttatataaagaacgtgggatgactagttttgcatgtgttagt
cgactacgacaaattttaaaaactaaaaagattggtcattcaggaacacttgatccaggt
gtagcgggtgttttaccaatttgtgttggaaatgctaccaaagttgttgattatttgatg
caatcaggaaaacaatatcaaggcgagcttttaattggttttgcgactactactcaagac
cttgatggagaaaaaattgaggacaaagaagttacaaatgaaattccgactagtgaaatc
ctatcagccatgaattcattaacggggacaataatacaaatcccaccgatgtattcggct
gtaaaagtaaatggaaaaaaactttatgaatatgcaagagctggtgaaactgttgaacgg
cccaaacgacaagtgactattagcaaatttaaattactaagctcaaagtatgatgaggaa
aataaacaacaacgaatccgttttaatgttgaatgtagtaagggtacttatattcggacg
cttgttgttgaccttgcacgtaaactagggtatccaggagtaatgagtttgttaacgcgg
ttgaagagtggaggctttactcttgatcagactctaagtttagacaacgttcgcgatgct
gttgcgacccaaactctccagcaatatttgtatcctttagattatgctttgaaggactat
ccgcaattaacgattcaagaggctcaatggaaaaaggttcaaaatggaggatggctttct
ccaagtgaacttaatactagtgagaaggaaattgtgttatcatttgatggacaagtaaaa
gcactatatcattttgatccgaaaaataaaatgtataagccaactaaaatgtttgcagtt
aattga

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