Limosilactobacillus reuteri SD2112: HMPREF0538_21978
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Entry
HMPREF0538_21978 CDS
T01551
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
lru
Limosilactobacillus reuteri SD2112
Pathway
lru00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMPREF0538_21978 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lru01007
]
HMPREF0538_21978 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lru03016
]
HMPREF0538_21978 (aspS)
03029 Mitochondrial biogenesis [BR:
lru03029
]
HMPREF0538_21978 (aspS)
Enzymes [BR:
lru01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HMPREF0538_21978 (aspS)
Amino acid related enzymes [BR:
lru01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HMPREF0538_21978 (aspS)
Transfer RNA biogenesis [BR:
lru03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HMPREF0538_21978 (aspS)
Prokaryotic type
Other AARSs
HMPREF0538_21978 (aspS)
Mitochondrial biogenesis [BR:
lru03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HMPREF0538_21978 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
AEI58185
UniProt:
F8DPC8
LinkDB
All DBs
Position
2014116..2015918
Genome browser
AA seq
600 aa
AA seq
DB search
MKRTNYAGDTNEQQVGQEVVLKGWVAKRRNLGGLIFIDLWDREGIVQLVFNEKENPEAFE
IANAVRNQYVLEVQGKVQLRAEKEINPDMKTGKVEVAVDKVKVLAKSETTPFDITDGVDA
SEDLRMKYRYLDLRRPEMMRNLKLRSKVASIVHNYYDNEGFMDVETPDLTRSTPEGARDY
IVPSRVYPGHFYALPQSPQLFKQLLMAAGVDKYYQLARCFRDEDLRGDRQPEFTQIDTEM
SFATPEDIQTVTEGLIKRVMKEIVGVDVKTPFPRMEWQEAMDKYGSDKPDTRFGMLIHDL
SDIVKDSSFKVFANTVADGNYVRAIRVPGGADKYSRKDISKYEEYIKRFGAKGLAWVKVT
ADGYNGPVAKFLNDQVAQINEEMDAKEGDLILFVAGSFHVVSDSLGYLRRTIAEELDMIK
PDQWNYLWVVNWPMFEYDEGFGKWIAAHHPFTMLNEEDLHYLEDGEDPHKAHAQSYDIIL
NGNEIGGGSIRIHDPKIQEKVLKALGYTKERAEARFGFLLKALTMGMPPEGGLAFGLDRW
VMLLAQADSIRDVIPFPKNSKAVEPLTAAPGKVSEQQLDDLKIEFDEKIDYKLDQDPDEQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaacaaattatgctggggatacaaatgaacagcaagttggacaagaagttgtc
ttaaagggttgggtagctaagcgtcgtaacctaggtggacttatctttattgatttatgg
gatcgggaaggaattgttcaactagtattcaacgaaaaagaaaatccagaagcatttgaa
atcgcaaatgcggttcgtaaccaatatgttcttgaggttcaaggaaaagttcaattacgg
gcagaaaaagaaattaatccagatatgaagactggaaaagttgaagtagccgttgataag
gttaaggtattagcaaaatcagaaacaacgccatttgatattactgatggtgttgatgct
tctgaagacttacggatgaagtaccgttaccttgatttacggcgcccagaaatgatgcgt
aatttgaagttgcggagtaaggttgcttcgattgtgcacaattactatgataatgaaggc
tttatggatgttgaaacccctgatttaacacggtcaacaccagaaggagcacgtgactac
attgttccatcacgtgtttaccccggtcatttctatgctttaccacaatcaccacaatta
tttaagcaattgttaatggcagccggagttgataagtactatcaattagcacgttgtttc
cgggatgaagaccttcgtggtgaccgtcaaccagaatttacgcaaatcgatactgaaatg
agttttgcaactcctgaagacatccaaacagttacagaaggtttaattaagcgggtaatg
aaggaaatcgtgggggtagatgttaagactccattcccacggatggaatggcaagaagcc
atggacaagtacggttccgataagccggatactcgttttgggatgttgattcatgatctt
tctgatattgtaaaagacagttcatttaaggtttttgctaatactgttgctgatggtaac
tatgttcgtgcaattcgcgttcctggtggagcagataagtattcccggaaagatatttct
aagtatgaagaatacattaagcgttttggtgcaaagggacttgcatgggttaaggtaact
gctgatggttacaatggtccagttgctaagttcttaaatgatcaagttgcccaaatcaat
gaagaaatggatgccaaagaaggggacttaatcctctttgttgctggtagtttccacgtt
gtatcagattcacttggctaccttcgtcgtacaatcgctgaagagctagatatgattaag
cctgaccaatggaactacttatgggttgttaattggccaatgtttgaatatgatgaaggc
tttggaaagtggattgccgctcaccacccatttacaatgctaaatgaagaagacttacat
tatcttgaagatggggaagatcctcataaagctcatgctcaaagttacgatattatcttg
aatggtaacgagatcggtgggggatcaattcgtatccacgatccaaagattcaagaaaaa
gttctcaaagctcttggatatacaaaggaacgtgcagaggctcgctttggattcttactt
aaggccttaacaatgggaatgccacctgagggaggacttgcctttggtttggaccgatgg
gttatgttactagctcaagctgatagtattcgggatgttattccattccctaagaactcg
aaggcagttgaaccattaacggcagctccaggcaaagttagtgaacaacaacttgatgat
cttaaaattgaatttgatgaaaaaattgattacaagctcgatcaagatccagatgagcaa
taa
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