Limosilactobacillus reuteri SD2112: HMPREF0538_22011
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Entry
HMPREF0538_22011 CDS
T01551
Symbol
rluB
Name
(GenBank) pseudouridine synthase B, ribosomal large subunit
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
lru
Limosilactobacillus reuteri SD2112
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lru03009
]
HMPREF0538_22011 (rluB)
Enzymes [BR:
lru01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HMPREF0538_22011 (rluB)
Ribosome biogenesis [BR:
lru03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HMPREF0538_22011 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
AEI58218
UniProt:
F8DPG1
LinkDB
All DBs
Position
2049364..2050080
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AA seq
238 aa
AA seq
DB search
MERLQKAMAEAGVASRRASEKLILQGKVAVNGKIVTELGTKVGVHDEIVVNGVPIHHEQH
VYYLLNKPRGVISSAHDDKGRRTVVDIIHDAEIDERIYPVGRLDYDTTGILLLTNDGALA
NKMMHPKYEVEKTYVAKVEGIVKNDELKQLRLGVVIDGRKTKPAKSKLLNVDRAKKTSLV
QLTIHEGRNHQVKNMFKAVGHPVTKLHRETYGPLNLYGLQPGEFRALKPEEVQLLKKK
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggaacgattacaaaaggcaatggcggaagcgggagtagcttctcgtcgggcatcagaa
aaacttatccttcaagggaaagttgcagttaatggcaaaattgtgactgaacttggcact
aaagttggcgttcacgatgagattgtagtaaatggtgttccaatccatcacgaacagcac
gtttactacttgttaaataagccgcggggagttatctcaagtgctcatgatgataaaggc
cgtcgaacagtggttgatattattcatgatgctgagattgatgaacgcatttatccagtt
ggccgattggactatgatacaactggaattcttcttctaacaaatgatggtgctttggca
aataaaatgatgcatcctaaatatgaagttgaaaaaacctatgttgctaaggttgaagga
atcgtcaaaaatgatgagttaaaacaattacgtttaggggtagtcatcgatggtcgaaag
acaaaaccggctaaatcgaagctcttgaatgttgaccgtgccaagaagacaagccttgtt
caattaacaatccacgaaggacgaaaccaccaagttaagaatatgtttaaggcagtagga
catccggtgactaaacttcatcgtgaaacatatggaccattaaatttatatggtcttcag
ccgggtgaattccgtgcattaaagcctgaagaagtgcagttattaaagaaaaagtaa
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