Limosilactobacillus reuteri SD2112: HMPREF0538_22037
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Entry
HMPREF0538_22037 CDS
T01551
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lru
Limosilactobacillus reuteri SD2112
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lru03032
]
HMPREF0538_22037 (topA)
03400 DNA repair and recombination proteins [BR:
lru03400
]
HMPREF0538_22037 (topA)
Enzymes [BR:
lru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HMPREF0538_22037 (topA)
DNA replication proteins [BR:
lru03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF0538_22037 (topA)
DNA repair and recombination proteins [BR:
lru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF0538_22037 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AEI58243
UniProt:
F8DPI6
LinkDB
All DBs
Position
2075826..2077766
Genome browser
AA seq
646 aa
AA seq
DB search
MGVDIENDYTPDYISIRGKGDVIKELRKDVKNAKAVYLASDPDREGEAIAWHVSNILKLD
DDQKNRVTFNEITKDAVKEAFKEPREINMDLVDAQQARRVLDRLVGYSISPILWKKVKKG
LSAGRVQSVALYLIIQRENEIKNFKPEEYWTIDADFKKGKEEFKASFYGENGKKVSLKNN
DDVQAVLSKIDKNKDFDITKVTKKERRRQPQPPYTTSTMQQDANRRLNFRTRKTMMAAQM
LYEGIDIKEGAPVGLITYMRTDSTRVASIAKHEASNYIHENYGAEYAAIKPVKGKLPEGA
QDAHEAIRPTSVYRTPAKMKQYLTSDQYKLYNLIWSRFVASQMTAEVIDTMSVNLQQNGV
DFRANGSKVKFPGFTKVYKRGTEKDNLLPELTEDDKAKMIKDDPAQHFTQPPARYTEAAL
IKTLEENGVGRPSTYAPTLDTIQRRYYVRLVSRHFEPTELGEIVNRIIEKQFPDIVNVQF
TADIEGKLDEIEEGKQNWINVVDKFYQPFSKEVDAAEEEVDKIEMKDELAGTDCEICGAP
MVIKMGRYGKFYACSRFPNCRNTKAIVKDTGITCPKCGQGTVVERKSKKNRTFYGCSRYP
DCDFVSWDKPIGRNCPKDGHFLVEKKVKGGKQVVCPNGDYQEEVQK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgggggtagatattgaaaatgactacacccctgattacatttcaattcgggggaagggt
gatgtaattaaggaactacggaaggacgttaaaaatgcaaaagccgtatatcttgcatct
gacccggaccgtgaaggggaagcaattgcctggcacgtttcaaatattttaaagcttgac
gatgatcaaaagaaccgggttacctttaatgaaattactaaagatgctgttaaagaagct
tttaaggaaccccgagagattaatatggatctcgtggatgcccagcaggcacgacgggta
ttagatcgattagttggatattcaattagcccaattttatggaagaaagtcaaaaagggc
ttaagtgctggtcgtgttcaatcagttgccctttatctgattattcaacgtgaaaatgaa
attaaaaacttcaaaccagaggaatactggacaattgatgctgatttcaagaagggcaaa
gaagaattcaaggctagtttttacggtgaaaatggtaagaaggtttccttgaagaataat
gatgatgttcaggcagtcctttctaaaatcgataaaaataaagatttcgatattactaag
gtgactaaaaaagaacgtcggcggcaaccacagccaccatatacgacctcgaccatgcaa
caggatgctaatcgtcgtttgaacttccgaacacgaaagacaatgatggcagcacaaatg
ttatatgaagggatcgacattaaagaaggagcaccggttgggttaattacctatatgcgg
acggactcgactcgggtagcgtcaattgctaagcatgaagcgtctaactatattcatgaa
aactatggagcagaatatgcggcaataaagccggttaagggaaaattacctgaaggggcc
caggatgctcacgaagctattcggccaacttcagtctatcggacaccagctaaaatgaag
caatatttaacctccgaccagtataaactttataatttgatttggtcgcggtttgtggct
agtcaaatgactgcggaagtaattgatacgatgagcgttaacctccagcaaaatggggtc
gatttccgtgcaaatggatcaaaagttaagtttcctgggtttacgaaagtatataagcga
ggaactgaaaaagataacttgttgccagaattaactgaagatgacaaggcaaaaatgata
aaggacgatccagctcagcactttacccagccacctgctcgttatacagaagcggctctt
attaaaaccttggaagaaaatggcgtcggtcggccatcaacctatgcgccaacccttgat
acgattcaacgacggtactatgttcgccttgtatcacgccactttgagccaactgaattg
ggtgaaattgtcaaccgaattatcgaaaagcaattccctgatattgtcaatgtccaattt
actgccgatattgaaggcaaacttgatgagattgaagagggtaagcagaactggattaat
gttgttgataaattctatcaaccattctcaaaagaagttgatgcagctgaagaagaggtt
gataagattgagatgaaagatgagcttgctggcacagattgtgaaatttgcggggcccca
atggttattaaaatgggtcgttatggtaagttctatgcatgttctcgtttcccaaattgt
cggaataccaaggcgattgtaaaagataccggaattacatgtccaaagtgtgggcaagga
acggttgttgaacgaaaatcaaagaagaaccgaactttctatggttgttcccgttatcca
gattgtgacttcgtttcatgggataaaccgattggacgtaattgtcctaaggatgggcac
ttccttgttgaaaagaaagtcaagggtggtaaacaggttgtctgtccaaatggagactac
caagaagaagttcagaagtaa
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