Limosilactobacillus reuteri SD2112: HMPREF0538_22295
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Entry
HMPREF0538_22295 CDS
T01551
Symbol
sthIM
Name
(GenBank) type III restriction-modification system DNA methylase
KO
K07316
adenine-specific DNA-methyltransferase [EC:
2.1.1.72
]
Organism
lru
Limosilactobacillus reuteri SD2112
Brite
KEGG Orthology (KO) [BR:
lru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lru02048
]
HMPREF0538_22295 (sthIM)
Enzymes [BR:
lru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
HMPREF0538_22295 (sthIM)
Prokaryotic defense system [BR:
lru02048
]
Restriction and modification system (R-M system)
Type III R-M system
HMPREF0538_22295 (sthIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N6_N4_Mtase
TypeIII_RM_meth
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
AEI58499
UniProt:
F8DS65
LinkDB
All DBs
Position
pLR584:8928..10934
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AA seq
668 aa
AA seq
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MQIDTRLMEQVKDVLQQFGTKYITKDGSLKRNAVISDLDKYDKDLMVALLANNLIKDEYT
EQIADTTVFKLNHFIEMFEYQEFWGNSFTKYANRIGLTSDDKFISDSDDVVLDFPYKDTV
LKAGMTKDDVDKEVGADEPFLNETLAHSEISELFEPKVLVNAKLYDTEGEHKATNFDDND
NLVIKGNNLIALHSIAKKYAGKIKLIYLDPPYNTGSDSFKYNDRFSHATWLTFMKSRLEI
AKTLMSDNGVIAIQLDDSEGPYLKVLTDSIFGRDNELFTQYVLVRYANKTLKSDMDYHKQ
IEQIHYYKKNSNAEVKPNKDKVPYDYSKFCYEVKTTGKPSSSIMLGDKQVDIFTKDQVEF
KKTSGNPEGLKEIWASGTILNGNSSGRFFRDYLSGRYKKDGYGVVYKVYDIGDDGNDYRF
FTGPKKAGATKGKYYQGVPLDVKNGKTSQKLLPIPGFIDMAGSFGNDRLEGGVELRNGKK
PEKLLKNIIKYFSNKNDYVMDFFAGSGSTLATAMKMSRKFIAIEQINEQIIKINKRLNNV
IHGDQTGISKEVNWQGGGSFVYTELMKKNQGFLYDLQKATTIDELNAVYDRMKQGADLDF
RVDLNKFENDSERASLPFEDQKKLLIKLLDKNQLYYNEANIDDADVRDLISDSDYRFNKS
FYNGKESK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatagatactagattaatggagcaggttaaagatgttcttcagcaattcggtact
aagtatataaccaaagatggttctctaaaacgtaatgccgttattagcgaccttgataaa
tatgataaagacttaatggtagcattgttggccaacaatcttattaaagatgaatatact
gaacaaatagctgatacaacagtattcaaattaaatcactttattgaaatgtttgaatat
caagagttttggggtaatagttttaccaaatacgccaaccgaattggccttaccagtgat
gataaattcattagtgactcagacgatgttgtattagatttcccctataaagatactgtt
ctaaaagcaggtatgactaaagatgatgttgataaagaagtcggggctgatgaacctttt
ttgaacgaaacattagctcattctgaaattagtgagttatttgaaccaaaagtattagtt
aatgcaaaactatacgatacagaaggcgaacacaaagctaccaattttgatgataatgat
aatttagtaattaagggcaataatttaatcgctctacatagtattgccaaaaagtacgcc
ggaaaaattaaactcatttatttggatccaccctataacacaggatctgattcctttaaa
tataatgatcgatttagtcatgctacttggctcacgtttatgaagagtcgattggaaata
gcaaaaacgctaatgtctgataacggggtcattgctatccaactggatgattctgaggga
ccatatctaaaggtactgacagactcaatatttggtcgtgacaatgaattattcacgcaa
tatgtgttagtccgatatgctaataagacattgaaatcagatatggattatcataaacaa
atagaacaaatccattactataaaaaaaattctaatgctgaggtaaaacccaacaaggac
aaagttccatatgattattcaaaattctgttacgaagttaaaacgactgggaaaccttct
tcatcaattatgcttggcgataaacaagttgatattttcactaaagaccaggttgagttt
aagaaaacctccggtaatccggaaggtcttaaagaaatatgggcttctggaacaatctta
aatggtaattcctctggaagattttttagagattatttaagtggccgttataaaaaagat
ggttatggtgtggtctataaagtttatgatataggcgatgatggtaatgactatagattc
tttacaggtccaaagaaagcaggagctactaaaggaaagtattatcaaggagttccccta
gatgttaaaaacggtaaaactagtcaaaagttattgcctataccaggcttcattgatatg
gcaggttcatttggaaacgatcgtcttgaaggaggcgtcgaattaagaaatggaaaaaag
cctgagaaattattgaaaaatattattaaatattttagtaataaaaatgattatgttatg
gactttttcgctggtagtggctcaacgttagctacagcaatgaaaatgagtcgaaaattt
atagcaatcgaacaaattaatgaacaaatcataaaaatcaataaacgattaaataatgtt
attcatggtgatcaaactggtatttccaaggaagttaattggcaaggtggcggttcattt
gtctacaccgaacttatgaaaaagaaccagggatttctttatgaccttcagaaggcaact
accattgacgagcttaatgcagtttatgaccgaatgaaacagggtgctgatctagatttt
cgtgtcgacttaaataaatttgaaaatgattctgaacgtgcttctctaccatttgaagat
cagaaaaagctgttaatcaagctacttgataagaaccaactttactataacgaagccaat
attgatgatgcagacgtccgtgacctgatctcggatagtgattatcgattcaataagagc
ttctacaacgggaaggagtcaaagtaa
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