Lynx rufus (bobcat): 124500982
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Entry
124500982 CDS
T08475
Name
(RefSeq) DENN domain-containing protein 4C-like
KO
K20163
DENN domain-containing protein 4
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lruf04131
]
124500982
Membrane trafficking [BR:
lruf04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124500982
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
Motif
Other DBs
NCBI-GeneID:
124500982
NCBI-ProteinID:
XP_046920818
LinkDB
All DBs
Position
Unknown
AA seq
1956 aa
AA seq
DB search
MIEDKGPRVTDYFVVAGLTDTSTLLDQEINRLDTKSTGPKAPITDIAVINKSAGETVPEG
YTCVEATPSALQANLNYGSLKSPELFLCYKRARDKPPLTDIGVLYEGKERLIPGCEVIQA
TPYGRCANVNNSSTTSQRIFITYRRAPLIRPQNSLAVTDICVIVTSKGETPPHTFCKVDK
NLNCGMWGSSVFLCYKKSVPASNAIAYKAGLIFRYPEDDYESFPLSESVPLFCLPMGATI
ECWDPQTKYPLPVFSTFVLTGSSAEKVYGAAIQFYEPYSRELLTEKQLMQLGLLTPVERK
VVSKSINSNKCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMQNIPFPSA
QRPRILVQLSVHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATLLLFVLLESKILLH
SLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAAVLSAPLPFIVGVDSRYFDLHDPP
QDVVCIDLDTNMLYVSDEKKNMNWKQLPKKPCKNLLSTLKKLYPQLSSVHRKTQESSAIE
MTPIEADFSWQKKMTQLEMEIQEAFLRFMASILKGYRTYLRPITEAPSNKATAVDSLFDR
QGFLKSRDRAYTKFYTNLSKTQIFIRFIEECSFVSDKDTGLAFFDDCIEKLFPDKGTEKT
DKVDFDLAEDTKLIELDDSQKSEHTVFIMPPEPPPDDGKDLSPKYSYKYFPRLDLKLFDR
PQELKFCFSRHPTGNSITNSPALMAKRTKQEIKTAHKLAKRCYTNPPQWAKCLFSHCYSL
WFICLPAYVRVSHPKVRALQQAYDVLIKMRKTDVDPLDEVCYRVVMQLCGLWAHPVLAVR
VLFEMKTAKIKPNAITYGYYNKVVLESPWPSSTRSGIFLWMKVRNVVRGLAQFRQPLKKT
VQKSQVSSISAPQNATGGSDGDTVSHGSVDSSNDANNGEHTVFVRDLIRLDSTDNHFSTG
GQSDQGYGSKDELIKDDAEIHMPEEQVARELITKTKVQTEEVCDVSAVVAKLSQPSAESQ
SPTEPPAWGSSIVKVPSGIFDLNGRKSSTGSTSNVPFSTQDPVEDAVFEVTNPKKNGDRG
DKRQKHFPERSCSFSSESRAGMLLKKSSLDLNSSEVAIMMGADAKILTAALACPKTSPLR
VASTHSFETANSCHLVDTRTRVSESTWDSEHRSSSVLEMLEESQELLEPVIEDSAAKTTM
KKDACDSLQNDSNQPRDLKVEPKDVINKRSSLHGVVKAIEREDVETGLDPLSLLATECTG
VKSQDSEDKMSSPVIARNLADEIESYMNLKSPLGSKSASMELHGEGSRESGTITACIHSL
ERRSSLPLEHGPAAQEVPESEKSSPAESRSKAFTGRFKQQTPSRAHKERSPSLSALVRSS
PHGSLGSVVNSLSGLKLDNILSGPKIDVLKSGMKQAATVASKMWVAVASAYSYSDDEEET
NRDYSFPAGLEDHILGENMSPNTSVSGLVPSELTQSNTSLGSSSSSGDVGKLQYSTGEPP
FPRSVKGQDFEKSDHGSSQNTSMSSIYQNCAMEVLMSSCSQCRACGALVYDEEIMAGWTA
DDSNLNTTCPFCKSNFLPLLNIEFKDLRGSASFFLKPSTSGDSLQSGSIPLASESSEHKP
VSASAEPDLINFMDFPKQNQTITEETTSAIESSDEIKKAGGEVQTMKISSVPNSLSKRNV
SLTRSHSVGGPLQNIDFSQRPFHGISTVSLPNSLQEVVDPLGKRPNPPPVSVPYLSPLVL
RKELESLLENEGDQVIHTSSFINKHPIIFWNLVWYFRRLDLPSNLPGLILTSEHCNGGVQ
LPLSSLSQDSKLVYIQLLWDNINLHQEPGEPLYVSWRNFNSEKKLSLLSEEQEATSALVE
TIRQSIQHNDVLKPINLLSQLIKPDMKRQRSLYREILFLSLVSLGRENIDIEAFDNEYGL
AYNNLSSEILEKLQKIDAPPSISVEWCRKCFGAPLI
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaagggccaagagtgactgactactttgttgtggcaggtctcactgac
acatctactcttttggatcaagaaataaatcgtttagatactaagtcaactgggcctaaa
gctccaattacagacattgcagttattaacaaatctgctggggagacagtacctgaaggt
tacacctgtgttgaagccactccatcagctctccaagcaaatttgaactatggaagtctg
aaaagccccgaacttttcctctgttataagagagcaagagacaaaccaccccttaccgac
attggagttttatatgaagggaaagaaaggcttattccaggatgcgaagtgatccaagcc
acaccctatggtcgctgtgccaatgtcaacaatagttcaactacttcacaaagaatcttt
atcacttatcgaagagctcctctaattcgaccccagaattccttggctgtaactgatatc
tgtgttattgtaaccagtaaaggagaaacccctcctcatactttctgcaaggttgacaaa
aacttaaattgtggaatgtggggttccagtgtatttctgtgttataagaagtctgtgcct
gcttctaatgcaatagcatacaaagctggtttaatttttagatatccagaagatgactat
gagtcatttccactctcagaatctgtacctctcttctgccttccaatgggagctactatt
gaatgttgggatcctcaaaccaaatatccacttccagttttttcaacttttgttctgaca
ggttcttctgctgaaaaggtatatggagctgccatccagttttatgaaccttattctcgg
gaacttctgacagagaaacagcttatgcagctgggcctcttgacccccgtggagagaaaa
gtagtctccaaatccatcaattcaaacaaatgcatttgtttactctcacactggcctttt
tttgaagcttttagaaaatttctcatgtttatctacaaactttctgtgtctggaccacat
cctcttcccattgaaaagcatatttcacacttcatgcaaaacatcccttttccttcagca
caaagaccaagaatccttgtacagctttcagtccatgatgcattaatattatcacagcca
gtttctacacctttaccattaagtggagccaactttagcaccttgttaatgaatctgggt
cctgagaattgtgcaacactgctgctctttgttttacttgagagtaagattctgctacat
tctcttaggccagctgtgttgactggagtagctgaagctgttgtagctatgatctttcca
tttcagtggcagtgcccgtacattcccctttgtcctctgtcactggcggcagtgcttagt
gcacctttaccatttatagttggagttgactccaggtattttgatcttcatgacccacca
caagatgttgtttgcattgacttggatacaaacatgttatatgtatcagatgaaaagaag
aacatgaattggaagcagcttcccaaaaagccatgcaaaaatctgcttagtaccttaaag
aagttgtatccccagctatcttcagttcaccgaaaaactcaggaaagttcagcaattgag
atgactccgattgaagcagatttctcttggcaaaaaaagatgacgcaacttgaaatggaa
attcaagaggcatttttgcgttttatggcatccattttaaaaggatatagaacatatctc
agaccgattacagaggctccttcaaataaagccacagctgttgattcattgtttgacaga
cagggatttttaaaaagtcgagatcgtgcctatacaaaattctacaccaacttatccaaa
acacagatttttattcgtttcattgaagaatgtagttttgtaagtgataaagatactgga
ttggcattttttgatgactgcatagaaaagttgtttcctgataaaggcacagagaaaaca
gataaggttgattttgatttagctgaagataccaaattgatagagctagatgattcacag
aaaagtgagcacactgtattcataatgccaccagagccacctcctgatgatggaaaggat
ctgtcaccgaagtacagttacaaatactttccaagactggaccttaagctttttgacaga
ccacaggagttgaaattttgttttagtagacaccctactgggaatagcattacaaacagt
ccagctctcatggctaagagaactaaacaggagataaaaacggctcataagttggcgaag
agatgttacacaaatccaccacaatgggccaagtgtctcttcagtcattgttacagctta
tggtttatttgtctcccagcctatgttagagtttctcatcctaaggtcagagcacttcag
caggcatatgatgtacttattaagatgaggaaaacagatgtggatccactagatgaggtg
tgctatcgagtagtaatgcagctttgtggactttgggctcatcctgttttagcagtgaga
gtcttatttgaaatgaaaactgctaagataaagccaaatgctattacttatggttattat
aataaggtagttttggagagcccgtggcctagcagtacccgcagtggtatcttcttatgg
atgaaggtacggaatgtggtacgtggcttggcacaatttaggcagccgcttaaaaagact
gtgcaaaagtcacaggtctcttcaatatcagctcctcagaatgcgacaggtggaagtgat
ggggacacggtgagccacggtagcgtggatagttctaatgatgctaacaatggggagcac
acagtcttcgtcagagatttaatcaggcttgattccactgataatcactttagcacaggt
ggtcagtctgaccaaggctatgggtctaaggatgaacttataaaggatgacgcagaaatt
catatgcctgaagaacaagtagcaagagaattgataactaaaacaaaagtgcaaacagaa
gaagtgtgtgatgtctctgctgttgtagcaaaactgtcacaacctagtgcagagtcacag
agtcctactgagcctcctgcatggggcagcagtattgtgaaagttccatctggtatattc
gatctcaatggcaggaaaagcagcactggtagtacatcaaatgtgccattttctactcaa
gatccagttgaagatgcagtttttgaagttactaatcccaagaagaatggtgatagagga
gataaaagacaaaagcatttcccagagaggagttgtagtttcagttctgaaagtcgagct
ggaatgttgcttaagaagagcagtttggatctgaattcaagtgaagtggctattatgatg
ggagcagatgccaagattctcacagccgcactggcctgtcctaagacttctccactccgt
gttgcgagcacccacagctttgagactgctaacagttgtcatctagttgatactaggact
cgtgtgtctgaaagcacttgggattccgagcacagatcttcttcggtattagagatgctt
gaagagagccaagagctcctggaacctgtgattgaggacagtgcagcgaaaactactatg
aaaaaggacgcatgtgacagtctccagaatgatagtaatcagcccagagacttgaaagta
gaacccaaagatgtaataaataagaggagtagtttacatggtgttgttaaagctattgag
agggaggatgttgaaactggactagatcctttgtctcttttggccactgaatgtactgga
gtaaaatctcaagattctgaagataagatgtcttctccagttattgcacgcaatctggct
gatgaaattgaaagctatatgaacctaaagagtcctttgggtagcaagtctgctagtatg
gaattacatggagagggaagcagagagtctggcaccatcactgcatgtattcactctcta
gagaggcgatcaagcctacctttagagcacggtccggcagcacaggaagttcctgaaagt
gaaaagagctctcctgcagaatctaggtctaaagctttcactgggcgtttcaagcagcag
actccctctcgtgctcacaaagaacgttcaccttctctgtcagcactagtgcggtcttca
ccacatggctcgttgggctctgtggtaaactctttgtcaggactaaagctagataatata
ctctcaggacccaagatcgatgtcctcaaatctggcatgaaacaagcagctacggtagcc
agtaagatgtgggtagctgtagcgtctgcctatagctactcagatgatgaggaggaaact
aacagagattacagcttccccgctggccttgaagaccatattttgggggagaatatgtca
cctaacacgagtgtctcagggttggttcccagcgaacttacccagagcaacacaagcctt
ggcagtagcagcagcagtggagatgtaggaaaactgcaatactcaacaggtgaacctcca
tttccaagaagtgtaaaagggcaggactttgaaaaatcagaccatggttcttctcaaaac
accagcatgtctagcatctatcagaattgtgcaatggaggttttgatgtcaagttgttca
caatgcagagcttgtggagcgttagtttatgatgaagaaattatggctggatggacggca
gatgattcaaatttgaatacaacctgtccattctgtaaaagcaacttcttgcctcttctc
aatatagaatttaaagacttgagaggctctgcaagctttttcctgaaaccaagcacctct
ggtgacagtttacaaagtggcagcattccattggcaagcgaatcttcagagcacaaacct
gtgtccgcttcagcagaacctgacttgatcaactttatggatttccccaaacaaaaccag
accataactgaagagacaacctctgcaattgaatcaagtgatgaaataaagaaagccggt
ggagaagtccaaaccatgaaaatttcatctgtgcctaatagtttatcaaagcgaaatgta
tctttgacgcgaagtcacagtgttgggggtcccttgcaaaatattgacttttcccagcga
ccgtttcatggcatttcaacagtcagtcttcccaacagtctgcaggaagttgtggatcct
ttaggaaaaagacccaatcctccccctgtttctgtgccctacttgagtcctctagtgctt
cgtaaagaacttgaatctttgctagaaaatgaaggtgatcaagtgattcacacatcctct
ttcatcaataaacatccaatcattttctggaacctcgtttggtatttcagacgtttggac
cttcctagtaacttgccaggacttatcctcacatctgaacattgtaatggaggtgtacag
cttcctctgtcatctctgtcccaggatagcaaacttgtgtatattcagctattatgggat
aatatcaaccttcatcaggaaccaggagaacctttgtatgtctcatggaggaattttaat
tctgaaaagaaattgtctctcctgtcagaggaacaagaagcaacaagcgctttagtagaa
accatcaggcagagtattcaacataatgatgttctgaaacccatcaacctactttcacag
ctaataaagccagacatgaaaagacaaaggagtttataccgagaaatcctcttcttatca
ttagtgtctcttggaagagagaatattgatattgaggctttcgacaatgaatatggactt
gcatacaataatttgtcttcagagattcttgagaagttacagaaaattgatgctccacca
agtatcagtgtggaatggtgcaggaagtgttttggagcacctctcatttaa
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integrated database retrieval system
