Lynx rufus (bobcat): 124501020
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Entry
124501020 CDS
T08475
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03082
ATP-dependent chromatin remodeling
lruf05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124501020
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
124501020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lruf03000
]
124501020
03021 Transcription machinery [BR:
lruf03021
]
124501020
03036 Chromosome and associated proteins [BR:
lruf03036
]
124501020
Transcription factors [BR:
lruf03000
]
Eukaryotic type
Helix-turn-helix
ARID
124501020
Transcription machinery [BR:
lruf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124501020
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
124501020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
124501020
NCBI-ProteinID:
XP_046920876
LinkDB
All DBs
Position
Unknown
AA seq
1874 aa
AA seq
DB search
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPSSSHQVLSE
IRPQAVEQVQTQTHVASTPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVK
RRAIPLPIQMYYQQQPVSTPVVRVDSVPDVSPSPSPAGIPHGPQTVGNHFQRTSVTNQSS
NLTATQMSFPVQGVHTVAQTVSRIPPNPTVHTHQQQNAPVTVIQNKAPIPCEVVKATVIQ
NSLPQTAVPVSIAVGGGAAQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
GQIPSGTPVTVIQQAVPQSHIFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
QPQDTVIIAPSQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQPSRVGFQNIAPKP
LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
QLTGQPNITPSSSPSPVPATNNQVPTAMSSSSAPQSQGPPPTVSQMLSVKRQQQQQHSPA
PSPQQVQVQVQQPQQVQMQVQPQQTNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
APQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQTSAQQLLVGQQNVQLVQSAMPPAGGV
QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNATQLIAPAG
ITMSGTQAGVGLQVQTLPATQTSPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
RKIEVMENPSCRRGTTNTSNGDTKENEMQVGSLLNGRKYSDSSLPPSNSGKIQSEANQCS
LISNGPSLELGENGTSGKQNSEQIDMQDIKSDLKKPLVNGICDFDKGDGSHLSKNIPNHK
TSNHVGNGEISPMEPQGTLDATQQDTAKGDQLERISNGPILTLGGSPSVSSIQEAPNVAT
QQFSGTDLPNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQVVAVPHSGSRVSHSPAL
SSDVRSTNGTAECKTVKRPAEDNDRETVTGIPNKVGVRIVTISDPNNAGCSATMVAVPAG
ADPSTVAKVAIESAVQQKQQHPPTYVQNVVPQGFGDVKEAPGPQEGTSRLAECAGLKRLQ
GNVPAENGQQNTPMTPSPAAQVQNQPSTSQPSPFSASSQQGDPVRKPGHNFMCLWQSCKK
WFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRFSFITHLQDKHCSKDALLAGLK
QDEPGQAGSQKSSTKQPAVGGTSSTPRAQKAIVNHPSAALMALRRGSRNLVFRDFTDEKE
GPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVLAISNMEASSTLAKCLYELNFT
VQSKEQEKDSEMLQ
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaaggcgcctccggacgagcggagaaagggactcgctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccttttaaaaaaatccctgcggtg
ggtgggaaggagctggatcttcacggtctctacaccagagtcactactttaggcggattc
gcgaaggtttctgagaagaatcagtggggagaaattgttgaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttacctagaaaaatac
gagaaagttcatcattttggggaggatgatgatgaggtaccaccaggcaatccaaagcca
cagcttcctattggtgcaattccatcttcctacaattaccagcaacacagtgtatcagat
tatctgcgtcaaagttatgggctatctatggacttcaattcgccaaatgattataataaa
ttggtgctttcactgttatctggactcccaaatgaagtggactttgctattaatgtatgc
actcttctatcaaatgaaagcaagcacgtcatgcaactcgaaaaagaccctaaaatcatc
actttattacttgctaatgccggggtgtttgacgacactttaggatccttttctactgta
tttggtgaagaatggaaggagaagactgatagagattttgttaagttttggaaggacatt
gttgatgataatgaagtacgtgacctcatttctgacagaaacaagtctcatgaaggtaca
tcaggagaatggatttgggaatctttatttcatccacctcgaaagctgggcattaatgat
attgaaggacaacgggtacttcagattgcagtgattttgcgaaatctttcctttgaggag
ggcaatgttaagctcttggcagctaatcgtacctgtcttcgtttcctattactttctgca
catagtcattttatttctctaaggcaattaggccttgacacattaggaaatattgcagct
gagcttctattggaccctgttgatttcaaaactactcatctgatgtttcatactgttact
aaatgcctaatgtcaagggatagatttttaaagatgaggggcatggaaattttgggaaat
ctttgcaaagcagaagataatggtgttttgatttgtgaatatgtcgatcaggactcatac
agagagatcatttgtcatctcactttacctgatgtgctgcttgtaatctcaacactcgag
gtgctatatatgctcactgaaatgggagacgtcgcttgcacaaaaattgcaaaagtagaa
aagagcatagacatgttagtgtgtctggtttctatggatattcagatgtttggccctgat
gcactagctgcagtaaaactcgtcgaacatccaagttccagtcatcaagttttatctgaa
attaggccacaagctgtagagcaagtccaaacccagacccatgtagcatccaccccagct
tccagagcagttgtagcacagcatgttgctccacctccaggaatagtggaaatagatagt
gagaagtttgcttgtcagtggctaaatgctcattttgaagtaaatccagattgttctgtc
tctcgagcagaaatgtattctgagtacctctcaacgtgcagtaaattagctcgtggtgga
atcctaacttcaactggattttataaatgtcttagaacggtctttccaaatcatacagtg
aagagagtggaggattccagcagcaacgggcaggcacatattcatgtggtcggagtaaaa
cggagggctataccacttcccattcagatgtactatcagcagcaaccagtctctactcct
gttgttcgtgttgattctgttcctgatgtatctccaagtccttcacctgcaggaatccct
catggaccacaaactgtaggaaaccattttcagaggacttctgttaccaaccaatcttca
aatttgactgcaacacaaatgtcttttccagtacaaggtgttcatactgtggcacagact
gtttcaagaattccaccaaatcctacagttcatacccaccagcagcaaaatgctccagtg
actgtcattcaaaataaagctccaattccttgtgaagttgttaaggctacagtaattcag
aattctctaccccagacagcagttcctgttagtattgctgtgggaggaggagctgctcag
agttctgtcgttcagaatcatagtacaggaccacaacccgttacagttgtaaattcccag
acattgcttcatcatccatctgtaattccacaacagtctccattacacacagtggtacca
ggacagataccttccggcactcctgttacagtaattcagcaagccgtcccacagagtcat
atatttggcagagtacagaacataccagcatgtacttctacagtttcacagggtcaacag
ttaatcaccacatcaccccagcctgtgcaaacttcatctcaacaaacatcagctggtagc
cagccacaagacaccgttatcatagcaccttcacaatacgtaacaacttctgcatccaat
attgtctcagcaacgtccgtacagaattttcaggtagctacaggacagatggttaccatt
gctggtgtcccaagtccacaaccctcaagagtagggtttcagaacattgcaccaaaacct
ctcccttctcagcaagtttcatcaacagtggtacaacagcccattcaacaaccacagcag
ccaacccaacaaagcgtagtgattgtaagccagccggctcaacaaggtcaaacttatgca
ccagccattcaccaaattgttcttgctaatccagcagctcttccagctggtcagacagtt
cagctaactgggcaaccaaacataactccatcttcctcaccatcacctgtcccagctact
aataaccaagtcccaactgccatgtcatcttcttccgcccctcagtcacaaggaccacct
cctaccgtcagtcagatgctgtctgtgaagaggcagcagcagcagcagcattcaccagcg
ccctcaccacaacaggtacaagtacaggttcagcagccacaacaagtacagatgcaagtt
cagccacagcagacaaacgcaggcgttggtcagcctgcttctggtgagtcaagtctgata
aaacagttgctgcttccaaagcgtggtccttcaacaccaggtggtaagctaattctccca
gctccacagattcctccccctaataatgctagagctcctagccctcaggtggtataccag
gtggccaataaccaagcagcaggttttggagtgcaggggcaaacttctgctcagcagcta
ttggttgggcagcaaaatgttcagttggtccaaagtgcaatgccacctgcagggggagtg
caaactgtgcccatctcgaacttacaaatattgccaggcccactgatctcaaatagccca
gcaaccattttccaagggacttctggcaaccaggtaaccataacagttgtgccaaataca
agttttgcaactgcaactgtgagtcagggaaatgcaactcagctcattgctccagcagga
attactatgagtgggacacaagcaggagttggacttcaggtgcaaacgcttccagccact
cagacatctccagctggacaatcatcctgtactactgctactcccccgttcaaaggtgat
aagataatttgccaaaaggaggaggaagcaaaagaagcaacaggtttacatgttcatgaa
cgtaagattgaagtcatggagaacccgtcctgccgacgaggaaccacaaacaccagcaat
ggggatacaaaggaaaatgaaatgcaggtgggaagtcttttaaatgggagaaagtacagt
gactcaagtctacctccttcaaactcagggaaaattcaaagtgaggctaatcagtgctca
ctaatcagtaatgggccatcgttagaattaggtgagaatggaacatccggaaaacagaac
tcagaacaaatcgacatgcaggatatcaaaagtgatttgaaaaaacctctggttaatgga
atctgtgattttgataaaggagatggttctcatttaagcaaaaacattccaaatcacaaa
acttccaatcatgtaggaaatggcgagatatctccaatggaaccacaagggactttagat
gccactcagcaagatactgccaaaggtgatcaactagaaagaatttctaatggacctata
ttaactttgggtggttcaccatctgtgagcagtatacaggaggctccaaatgtggcgaca
cagcagtttagtggtactgatttgcctaatggacctctagcttcaagtttgaattcagat
gtgcctcagcaacgcccaagtgtagttgtctcaccacattctacaacctctgttatacag
gggcatcaagtcgtagcagttccccactcaggatcaagagtgtcccattctcctgccctg
tcatctgacgttcggtctacaaatggcacagcagaatgcaaaactgtaaagaggccagca
gaggataatgatagggaaacagtcacaggaattccaaataaagtaggagttagaattgtt
acaatcagtgaccccaacaatgctggctgcagtgcaacaatggttgccgtgccagcagga
gcagatccaagcactgtagcgaaagtagcaatagaaagtgctgttcagcaaaagcaacag
catccaccaacatacgtacagaatgtggtcccacaggggtttggggatgtaaaggaggca
cctggaccccaagaagggacttccagacttgcagaatgtgcagggctgaaaagactgcag
ggaaatgtccctgctgagaatggccaacagaacactcctatgacgccttcaccagctgcg
caggtgcagaaccagcccagcacttctcagccttctccattcagtgcatctagtcaacaa
ggggatccagtgagaaaacctggacacaacttcatgtgtctgtggcagtcttgtaaaaag
tggtttcagacaccctcacaggttttctaccatgcagcaactgaacatggaggaaaagat
gtatatccagggcaatgtctttgggaaggttgtgagccttttcagcgacagaggttttct
tttattacccacttacaggataagcactgttcaaaagatgccctgcttgcaggattaaaa
caagatgaaccaggacaagcaggaagtcaaaaatcttctaccaagcagcctgctgtaggg
ggcacaagctcaactcctagagcacaaaaggccattgtgaatcatcccagtgctgccctt
atggcccttaggagaggatcaagaaaccttgtctttcgagattttacagatgaaaaagag
ggaccaataactaaacacatccgactaacagctgccttaatattaaaaaatattggtaaa
tattcagaatgtggtcgcagattgttaaagagacatgaaaacaacttatcagtgctagcc
attagtaacatggaagcttcctccacccttgccaaatgcctttatgaacttaattttaca
gttcagagtaaagaacaagaaaaagactccgaaatgctgcagtga
DBGET
integrated database retrieval system
