KEGG   Lynx rufus (bobcat): 124501277
Entry
124501277         CDS       T08475                                 
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    124501277
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lruf03400]
    124501277
Enzymes [BR:lruf01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     124501277
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     124501277
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     124501277
DNA repair and recombination proteins [BR:lruf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     124501277
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     124501277
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT Glycoamylase zf-C2H2_6
Other DBs
NCBI-GeneID: 124501277
NCBI-ProteinID: XP_046921257
LinkDB
Position
Unknown
AA seq 346 aa
MTRVMMRVCWLVRQDSRHQRIRLPHLEAVVVGRGPETKIIDKKCSRQQVQLKAECNKGYV
KVKQVGVNPTSIDSVIIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAESPGLETHRKRK
RSGNNDSIERGAAQEADSHTGLEPGSDPGQCSVPSKKEKDASTKKESLGHWSQGLKISMQ
DPKMQVYKDEQVVVIKDKYPKARHHWLVLPWASISSLKAVTREHLELLKHMHTVGEKMIT
DFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFIESQAVIEM
VQTAGRVSVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRRHWPK
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgacaagagtaatgatgcgggtgtgctggttggtgagacaggatagccggcaccagcga
atcagacttccacatttggaggcagtggtggttgggcgtggcccagagaccaagatcatt
gacaagaaatgttctcgacagcaagtacagttgaaagcagagtgtaacaaaggatatgtc
aaggtaaagcaggtaggggtcaatcccaccagcattgattcagtcataattgggaaggac
caagaggtgaagctgcagcctggccaggttctccacatggtgaatgaactttatccatat
attgtagagtttgaggaagaggcagagagccctggcctggaaacacacaggaagagaaag
aggtcaggcaacaatgattctatagaaaggggtgctgcccaggaagctgactcccataca
ggactggaacctgggagtgaccctggccaatgctctgtgccctcaaagaaggagaaagat
gcgtctaccaaaaaggaatcattgggccactggagtcaaggcttaaaaatttctatgcag
gatcccaaaatgcaggtttacaaagatgagcaggtagtggtgattaaggataaatacccc
aaggctcgtcaccactggctggtcttaccatgggcttccatttccagtctgaaggctgtg
accagggaacatcttgagctccttaaacacatgcacactgtgggggaaaagatgattaca
gattttgctgggtccagcaaactccgcttccgattgggttaccatgccattcccagcatg
agccatgtacatcttcatgtgatcagccaggattttgattctccttgcctcaaaaacaaa
aaacattggaattctttcaatacagaatacttcatagaatcacaagctgtgatagagatg
gtacagaccgctggcagagtgagtgtccgagatgggatgcctgagctcttgaagctgccc
ctccgttgtcacgagtgccagcagctgctgccttccattcctcagctgaaagagcatctc
aggagacactggccaaagtga

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