Lynx rufus (bobcat): 124501440
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Entry
124501440 CDS
T08475
Name
(RefSeq) aladin isoform X1
KO
K14320
aladin
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124501440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124501440
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124501440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
ANAPC4_WD40
WD40
WD40_CDC20-Fz
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
PD40
DSE1_N
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_2nd
WDR90_beta-prop_4th
DUF5789
Motif
Other DBs
NCBI-GeneID:
124501440
NCBI-ProteinID:
XP_046921577
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MCSLGLFPPPPPRGQVTLYEHNNELVTGNSYESPPPDFRGQWINLPVLNLTKDPLKTPGR
LDHGTRTAFIHHREQVWKRCINIWRDMGLFGVLNEIANSEEEVFEWVKTASSWALALCRW
ASSLHGSLFPHLSLKSEDLIAEFAQVTNWSSCCLRVFAWHPHTNKFAVALLDDSVRVYNA
SSTIVPSLKHRLQRNVAALAWKPLSASVLAVACQTCILIWTLDPTSLSTRPSSGCAQVLS
HPGHTPVTSLAWAPSGGRLLSASPVDAAILVWDVSTETCVPLPWFRGGGVTNLFWSPDGS
KVLATTPSAVFRVWEAQMWTCERWPTLSGRCQTGCWSPDGNRLLFTVLGEPLIYSLSFPE
RCGEGKGRVGGAKSATIVADLSETTVQTPDGEERLGGEAHSMVWDPSGERLAVLMKGNPR
VQDGKPVILLFRTRNSPVFELLPCGVIQGEPGAQAQLIAFHPSFNKGALLSVCWSTGRIA
HIPLYFVNAQFPRFSPVFGRTQEPPAGGGGSIHDLPLFTETSPISAPWDPLPGPPTAQPH
SPHSHF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtgctccctgggattgttccctccgccgccgcctaggggtcaagtcaccctctacgag
cacaataacgagttggtgacaggcaatagctatgagagtccgcctcctgacttccggggc
cagtggatcaatcttcctgttctgaacctgactaaggatcccctaaagacccctgggagg
ctggaccatggcacaagaactgccttcatccaccaccgggagcaggtgtggaagagatgc
atcaacatatggcgtgatatgggcctttttggggtgctgaatgaaattgcgaactcggag
gaagaggtgtttgagtgggtgaagacggcgtccagctgggccctggcactctgtcgatgg
gcctcctccctccacgggtccctgttcccccacctgtccctcaagagtgaagatctgatt
gccgaatttgcccaagtcacaaactggtccagctgctgcctgcgagtctttgcgtggcac
ccccacaccaacaagtttgcggtggccctgctagatgactcagtccgcgtgtataatgcc
agcagcactatagtcccctccctgaagcaccggctgcagcgaaatgtggcggctctggcc
tggaagcccctcagtgcctctgtcttggctgtggcctgccagacctgcattctcatctgg
accctggaccccacctctttgtctacccgaccctcttctggctgtgcacaagtgctctct
caccctgggcacacacctgtcaccagcttggcctgggcacccagtgggggacgactgctc
tcagcttcacctgtggatgctgctatcctagtatgggatgtctcaacggagacctgtgtt
ccccttccctggtttcgtggcggtggggttaccaatctgttctggtctccggatggcagc
aaagttctggctaccactccttcagctgtctttcgagtctgggaggcccagatgtggacg
tgcgagaggtggcctactctgtcagggcggtgtcagactggctgctggagcccagatgga
aaccgactgctgttcactgtattgggggaaccactcatttactccttgtcattcccagaa
cgttgcggggagggaaaggggcgcgttggaggtgcaaagtcagccaccattgtggcggat
ctgtctgagacaacagtacagacaccagatggagaggaaagacttgggggagaggctcac
tccatggtctgggaccccagtggggaacgtctggctgtgctcatgaaaggaaatccacgc
gtccaggatggtaaaccagtcatcctcctttttcgcactcgaaacagccctgtgtttgag
ctgcttccttgtggcgttatccagggggagccaggggcccaggcacagctcatcgctttc
catccttccttcaacaaaggggctctgctcagtgtgtgctggtccacaggccgaattgcc
cacatccctctgtactttgtcaatgcccagtttccacgtttcagcccagtgtttggccga
acccaggagcccccagctgggggcggaggctctattcatgatctgcccctctttactgag
acatccccaatctctgctccatgggatcctctccctgggccacctactgcccagccccac
tcccctcactcccacttctaa
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