Lynx rufus (bobcat): 124501547
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Entry
124501547 CDS
T08475
Name
(RefSeq) LOW QUALITY PROTEIN: high mobility group protein B1-like
KO
K10802
high mobility group protein B1
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03410
Base excision repair
lruf04140
Autophagy - animal
lruf04217
Necroptosis
lruf04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124501547
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124501547
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
124501547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lruf03036
]
124501547
03400 DNA repair and recombination proteins [BR:
lruf03400
]
124501547
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lruf04147
]
124501547
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
124501547
DNA repair and recombination proteins [BR:
lruf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
124501547
MMR (mismatch excision repair)
Other MMR factors
124501547
Exosome [BR:
lruf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
124501547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
124501547
NCBI-ProteinID:
XP_046921770
LinkDB
All DBs
Position
Unknown
AA seq
212 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCXEEHKKQHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPSL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEYEEDEKDEEEEEDEKDEEDDDDE
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgctgagaggagcacaagaagcagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaagttt
gaagacatggcaaaggcagacaaggcccgttatgaaagagaaatgaaaacttatatccct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgcccaaaaatcaaaggagaacatcctagccta
tccattggtgatgttgcaaagaaactgggagagatgtggaataacaccgctgcagatgac
aagcagccttatgagaagaaggctgcgaagctgaaggaaaaatatgaaaaggatattgct
gcataccgagctaaaggaaagcctgacgcagcaaaaaagggagtcgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggagtatgaggaagatgaaaaggatgaggaagaggag
gaagatgaaaaagatgaagaagatgatgatgatgaataa
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integrated database retrieval system
