Lynx rufus (bobcat): 124501566
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Entry
124501566 CDS
T08475
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04137
Mitophagy - animal
lruf04141
Protein processing in endoplasmic reticulum
lruf05014
Amyotrophic lateral sclerosis
lruf05022
Pathways of neurodegeneration - multiple diseases
lruf05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124501566
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124501566
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
124501566
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124501566
05022 Pathways of neurodegeneration - multiple diseases
124501566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124501566
03009 Ribosome biogenesis [BR:
lruf03009
]
124501566
04131 Membrane trafficking [BR:
lruf04131
]
124501566
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lruf04147
]
124501566
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
124501566
Ribosome biogenesis [BR:
lruf03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
124501566
Membrane trafficking [BR:
lruf04131
]
SNARE
SNARE associated proteins
Others
124501566
Autophagy
Aggrephagy
Other aggrephagy associated proteins
124501566
Exosome [BR:
lruf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124501566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
124501566
NCBI-ProteinID:
XP_046921820
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGGGTGGSVYTEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctctggagctgattcaaaaggtgatgacttatcaacagccattcttaaacagaag
aaccgtcccaatcggttaattgtcgatgaagccatcaatgaggacaacagtgtggtgtcc
ttgtcccagcccaagatggatgagctgcagttgttccgaggtgacacagtgttgctgaaa
ggaaagaagaggcgggaagctgtgtgcattgtgctttctgatgacacatgttccgatgag
aagattcgaatgaatagagttgttcggaataaccttcgtgtacatctaggggatgtcatc
agcatccagccgtgccctgatgtgaagtacggcaaacgtatccatgtgctacccattgat
gacacagtggaaggcatcactggcaatctcttcgaggtctaccttaagccatacttcctg
gaagcttatcgacccatccggaaaggagatattttccttgtccggggtggaatgcgtgct
gtagagttcaaagtagtggagacagatcccagcccttactgcattgttgctccagacaca
gtgatccactgtgaaggggagcctatcaaacgagaggatgaggaagagtccttgaatgaa
gtaggctatgatgacattggtggctgcaggaaacagctagctcagataaaggagatggtg
gagctacccctgagacatcctgccctttttaaggcaattggtgttaagcctcctcgggga
atcctgctctatggacctcctgggactgggaagaccctaattgccagagctgtggcaaat
gagactggagccttcttcttcttgatcaatggtcccgagatcatgagcaagttggctggt
gagtctgagagcaaccttcgtaaagcctttgaggaggctgagaagaatgctcccgccatc
atcttcattgatgagctagatgccattgctcccaaaagagagaaaacccatggggaggtg
gagcggcgtattgtatcacagttgttgactctcatggatggcctaaagcagagagcacat
gtgatcgtcatggcagcaaccaacagacccaatagcattgacccagcccttcgacgattt
ggtcgctttgacagggaggtagatattggaatccctgatgctacaggacgcttggaaatt
cttcagatccataccaagaacatgaaattggcagacgatgtggacctggaacaggtagcc
aatgagacccacgggcatgtgggcgctgacttagcagccttgtgctctgaggctgctctt
caggctatccgcaagaaaatggacctcattgacctagaggatgagaccattgatgctgaa
gtcatgaactctctggcagttactatggatgacttccggtgggccctgagccagagcaac
ccatcagcactgcgggaaactgtggtggaggtaccacaggtaacctgggaggatattggg
ggcctggaggatgtcaaacgtgaacttcaggagctggtccagtatcctgtggagcaccca
gacaaattcctcaaatttggcatgacaccctccaagggagtactcttctatggacctcct
ggctgtgggaaaaccttgctggccaaagccattgctaatgagtgccaggccaactttatc
tccatcaagggtcctgagctgctcaccatgtggtttggggagtctgaagccaatgtcagg
gaaatctttgacaaggcccgccaagctgccccctgcgtactattctttgatgagctggat
tcaattgccaaggcccgtggtggtaacattggagatggtggtggagctgcagaccgagtc
atcaaccagatcctgacagaaatggatggcatgtctacaaaaaagaatgtgtttattatt
ggggctaccaataggcctgacatcattgatcctgctattctgcgacctggccgtcttgat
cagctcatctatattccacttcctgatgagaagtcccgtgttgccatcctcaaggccaac
ctgcgcaagtccccagttgccaaggatgtagatttggagtttctggctaagatgactaat
ggcttctctggagctgacctgacagagatttgccaacgtgcttgcaagctggccatccgt
gaatccatcgagagtgagattaggcgagaacgggagaggcagaccaacccatctgccatg
gaggtagaagaagatgatccagtgcctgagattcgccgagatcactttgaggaagccatg
cgctttgctcgccgttctgttagtgacaatgacatccggaagtatgagatgtttgctcag
acccttcagcagagtcggggctttggcagcttcagattcccttcaggaaaccagggtgga
gctggccccagtcagggcagtggaggcggcacaggtggcagcgtgtacacagaagacaat
gatgatgacctgtatggctaa
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