Lynx rufus (bobcat): 124501584
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Entry
124501584 CDS
T08475
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lruf03009
]
124501584
Enzymes [BR:
lruf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
124501584
Ribosome biogenesis [BR:
lruf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124501584
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NOP2_rpt
Methyltr_RsmF_N
Methyltransf_31
FtsJ
PCMT
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_15
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
124501584
NCBI-ProteinID:
XP_046921857
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MGRKLDPAKEKRGPGRKARKQKGAETEVARFLPAAGDESSKRLSSRARKRAAKRRLGSAE
ALEMPKFPGAKPFPGKLPKGVSGGAVQTPGKKGAQSLLRASQGKKRPAPTHSSEEEEEED
DSEEDDVVNQGGLWDSEDSDADMIDDYGADSTSEDDDEGEELLPIERAARKQKAQEAVAG
SQWSEEETEEEEEEAEEESPESGPQKNDETDGGLQINVDEEEPFVLPSAGEIEQDAQTPD
LQRIHKRIQDIVAVLRDFGTQREEGRSRSEYLHRLQKDLATYYSYGDFLLGKLMDVFPLS
ELVEFLEANEVPRPITLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPI
GATPEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILAN
DANAERLKSVVGNLHRLGVTNTIISHYDGRQFPKVVGGFDRVLLDAPCSGTGVISKDPAV
KTNKDEKDILRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSIMVEENEWVVDYALKKR
NVRLVPTGLDFGQEGFTRFRERRFHPTLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQ
TGNSAASTPTNLDLPEVKDQMTPKPKGSSHPAKKARVAVKAKQQLQKRQHPKKASFQKQN
GISKGTDSSSPTVSCDTKSQASSKLQDSSQPAQKAEVIRGPKVPRKLKQQSAMPQASKKV
GFRKQNASRGTDTEVPVLSLSKTQAALKPEDCDQPLGNSKRAEKVKQQLPEQPFKKAAFR
KHNGTPKGPETSTVSLLSSSRPPPAKRRKSQSRGSSHLSS
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaagttggaccctgcaaaggagaagcgcgggccaggccgtaaggcccggaaa
cagaagggtgctgagaccgaagtagccagattcttgcctgcagcgggtgatgaaagttct
aagaggctgtctagtcgtgctcgaaaaagggcagccaagagaaggttgggttctgctgaa
gcccttgagatgcctaagtttcctggggccaaaccattccctggaaagttaccaaaagga
gtctctggaggagctgtccagacacctggtaagaagggagcccagtccttactccgtgct
tctcaaggcaagaagcgtccagcaccaacccacagcagtgaggaggaagaggaggaagac
gactccgaagaggatgatgtggtgaaccaggggggcctctgggactctgaggacagtgac
gctgatatgatagatgactatggcgctgactccacttcagaggacgatgatgaaggtgaa
gagctgctgcccattgagagggctgcccggaagcaaaaggcccaggaagctgttgctggg
agccaatggagtgaggaggagactgaggaggaggaggaggaagccgaggaagaatcccct
gagtcaggccctcaaaagaatgatgagacagatgggggcctgcagatcaatgtggatgag
gaggagccctttgtgctgccctctgctggggagatagagcaggatgcccagactccagac
ttgcaacgaattcacaagcgcatccaagatatagtggcagtgctgcgtgactttgggacg
cagcgggaggaaggtagatctcgttctgaatatctgcaccggcttcagaaggatctggcc
acttactactcctatggagacttcctgcttggcaagctcatggacgtctttcctctgtct
gagttggtggagttcttagaagctaatgaggtacctcggcccatcacactcaggaccaat
accttgaaaacccggcgccgagaccttgctcaggcgctaattaaccgtggagttaacctg
gatcccctgggcaagtggtcaaagactggactggtggtatatgattcttcagtgcccatt
ggtgctacccccgagtacctggctgggcactatatgcttcaaggagcctcgagtatgttg
ccagtcatggccttggcaccccaggaacacgagcggatcctggacatgtgttgtgctcct
ggaggaaagactagctacatagcccagctgatgaagaacacaggtgtgattcttgccaat
gatgccaatgctgagcggctcaagagcgtcgtgggtaatctgcaccggttgggagtcact
aacaccatcatcagccactacgatgggcgtcagttccccaaggtggtggggggctttgac
cgagtacttttggatgcaccctgcagtggcaccggggtcatctccaaagacccagctgtg
aagactaacaaggatgagaaggacatcctgcgttgtgctcaccttcagaaggagttgctc
ctgagtgctattgactctgtcaatgccacctccaagacaggtggctaccttgtctactgc
acttgttccatcatggtggaagagaatgagtgggtggtagactatgccctgaaaaagagg
aatgtgcggttggtgcccacaggtctagactttggccaggaaggttttactcgctttcga
gaaaggcgcttccaccccactctgcgttctacccgccgcttctatcctcacacccacaat
atggatggtttctttattgccaagttcaagaaattctctaattctatccctcaatcccaa
acaggaaattctgcagcttccacccctacaaacctagacttgcctgaggtgaaagatcag
atgacccccaagcctaagggcagcagccatcctgccaagaaagccagagtggctgtgaaa
gcaaagcagcagttgcagaaacggcaacatcccaagaaggcctccttccagaagcagaat
ggcatctccaaagggacagactccagttcgcctactgtatcttgtgacacaaagtcccaa
gcttcttctaagctccaagatagcagccagccagctcaaaaagctgaagtgatcagggga
ccaaaggtgcctaggaaactaaagcaacagtcagctatgccacaggcctccaagaaagtt
ggcttccgaaagcagaatgcttccaggggcacggacacggaagtgccagtgctatccctc
tccaagacccaggccgctctcaagcctgaggactgtgatcagccccttggaaacagcaaa
agggctgagaaggtaaagcagcaattgccagaacagcctttcaagaaagctgccttccgg
aagcataatggcacccccaaggggcctgagacttccactgtgtcccttctcagttccagc
cggcccccaccagcgaagaggagaaaatctcagtccagaggcagcagccatctgtcgtct
tag
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integrated database retrieval system
