Lynx rufus (bobcat): 124501628
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Entry
124501628 CDS
T08475
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03013
Nucleocytoplasmic transport
lruf05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124501628
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124501628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124501628
03036 Chromosome and associated proteins [BR:
lruf03036
]
124501628
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124501628
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124501628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
DUF2310
Motif
Other DBs
NCBI-GeneID:
124501628
NCBI-ProteinID:
XP_046921931
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MDRSGYGEMSSPVIREAEVTRTARKQSAQKRVLIRPSQDEIFANTTPRNQVIPRTPSSFR
PPFTPPSRSLLRHPDVSCILGTGGRSPRLTQSSGFLGNLSMVTNLDDSNWAAAFTSQRSG
LLTSTESHSVTEDVTLSAVMLREDDPGEAASMSMFSDFLQSYLKHSSNTVFDLVEEYENI
CSSQVNILSKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRDRIQSALEDENMF
VLSALNASEKVVVETLFQRDPLVRQSQLVVDWLESIAKDEIGDFSDNIEFYAKSVYWENT
LHTLKQRQLPSYIGSVRPLVTELDPDAPIRQKMPLDDLDREDEVRLLKYLFTLIRAGMTE
EAQRLCKRCGQAWRAATLEGWKLYHDPNVNGGTELEPVEGNPYRVIWKISCWRMAEDELF
NRYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTSVLTLDETEELPR
EYLEVNWTLEKVFEELQATDKKRVLEENQEHYHIVQKFLILGDIDGLMGEFNKWLSKSRN
NLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKAYIQLLINEKHTNLIAFYTCHLPQDL
AIAQYALFLEGVTEFEQRHHCLELAKEADLDIAAITKTVVENTRKKDNGEFSHHDVAPAL
DTGTTEEDRLKIDVIDWLVFDPAQRAEALKQGNAIMRKFLASKKHEAAKEVFLKIPQDSI
AEIYNQWEEQGMDSPLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMNSAPQKPTLIHQA
TFTEKVAHEHKEKKYEMDYVIWKGHLDALTADVKEKMYNVLLFVDGGWMVDVREDAEEDH
ERTHQMVLLRKLCLPMLCFLLHTILHSTGQYQECLQLADMVSSERHKLYLVFSKEELRKL
LQKLRESSLMLLDEGLDPLGYEIQS
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggacaggagcggctatggagagatgtcatctcctgtgatccgagaggcagaagtgact
cggactgcacggaaacagagtgctcaaaaaagagttttaattcggccatcccaagatgaa
atttttgctaatactacaccaagaaaccaggttatccctcgaactcccagttcatttcga
ccaccttttactccacccagccgaagcttactgaggcatccagatgtttcctgcattctt
ggaacaggagggaggtctccccggcttacacagtcttcagggttcttgggaaatctgtct
atggtaactaatctggatgacagtaattgggctgctgcattcacatcacagcgttcagga
ctcctcacaagtacagagtcccacagtgtaacagaggatgtaactctcagtgccgttatg
ttacgtgaggatgatcctggcgaagctgcatccatgagtatgttttctgatttcctgcag
tcttacttgaagcactcttcaaatacggtttttgaccttgtagaagaatatgaaaacatc
tgtagtagtcaggtgaatatactgagtaaaatagtgagccgagcaacacctggacttcag
aagttctcaaaaacagccagtatgctctggcttcttcaacaggagatggtcacatggagg
ctgctggcttctctgtatagagacagaatacagtcggcattagaagatgaaaatatgttt
gtacttagtgctcttaatgccagtgagaaagtggtggtggaaacattatttcagagagat
ccacttgttcgacaaagtcagctggtggtggattggctagagagcattgccaaagatgaa
attggagatttttctgataacattgagttttatgcaaaatcagtttattgggaaaatact
ctgcataccctgaagcagcggcagctgccttcttatataggaagtgtccgtccccttgtc
actgaattggaccctgatgctcccattagacagaaaatgccccttgatgatctggataga
gaagatgaagtcagattactcaaatatcttttcactctaatccgtgctggaatgacagaa
gaggcacaacgactctgtaaacgttgtggtcaggcatggagagctgcaacacttgaaggc
tggaaactctatcatgaccctaatgttaatggaggaacagaattagaacctgtggaaggg
aatccatatagagtgatttggaaaataagttgttggagaatggcagaagatgagcttttt
aatagatacgagagagcaatttatgcagctttaagtgggaatctcaagcagctgcttcct
gtctgtgacacctgggaagacacagtgtgggcctactttcgggtgatggtggacagtttg
gtagaacaggaaatccggacatcagtactgactctggatgaaactgaagaactccctagg
gaatatttggaagtaaattggaccttagaaaaggtatttgaagaacttcaagctactgat
aaaaagagagttctggaagagaatcaagaacattaccatatagttcaaaaattccttatc
ctgggagacattgatggtttgatgggtgaatttaacaaatggctttccaaaagcagaaac
aatctacctggacacctcctccgcttcatgactcacctcattttgttttttcgcacactg
ggactacagaccaaagaagaagtctccattgaagttttaaaggcgtacatccagctttta
ataaatgagaaacatacaaatctgattgcattttatacttgtcacttgcctcaagaccta
gctattgcccagtatgcattatttttggaaggtgttacagaatttgagcagcgccaccat
tgcctggagctggctaaggaagcagatttggatattgcggctataacaaagactgtagtt
gagaatacccgaaagaaagataatggtgaattcagtcatcatgacgtggccccagcccta
gatactggcactacagaggaggaccgcttaaaaattgacgtaattgactggttggtattt
gacccagcacagagggcagaagcgctaaaacaaggcaatgcgataatgagaaaattcttg
gcatcaaaaaagcatgaagctgcaaaagaggtatttttgaaaattcctcaggattcgata
gcagaaatctataatcagtgggaggaacaaggaatggacagtccacttcctgctgaagat
gataatgctatcagagaacatttatgcattagagcttatttggaagcccatgaaaccttt
aatgagtggtttaagcatatgaattcagctccacaaaaacctacattgatacatcaagca
acttttactgagaaagtggctcatgaacacaaagaaaagaaatatgaaatggattatgtt
atttggaaagggcatttggatgccctaactgctgacgtgaaggagaaaatgtacaatgtc
ttgttgtttgttgatggagggtggatggtggatgttagagaggatgctgaagaagaccat
gaaagaacacatcaaatggttttattgagaaagctttgtctgcccatgttgtgttttctg
cttcataccatattgcatagtaccggccagtatcaggaatgcttgcagttagcagacatg
gtatcctctgagcgccacaaactgtatctggtattttctaaggaagaactgaggaaattg
ctacagaagttaagagaatcctctctaatgctcctagacgagggacttgatccattagga
tatgaaattcagtcataa
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