Lynx rufus (bobcat): 124501631
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Entry
124501631 CDS
T08475
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04010
MAPK signaling pathway
lruf04020
Calcium signaling pathway
lruf04713
Circadian entrainment
lruf04925
Aldosterone synthesis and secretion
lruf04927
Cortisol synthesis and secretion
lruf04929
GnRH secretion
lruf04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124501631
04020 Calcium signaling pathway
124501631
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
124501631
04925 Aldosterone synthesis and secretion
124501631
04927 Cortisol synthesis and secretion
124501631
09159 Environmental adaptation
04713 Circadian entrainment
124501631
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
124501631
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lruf04040
]
124501631
Ion channels [BR:
lruf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124501631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
124501631
NCBI-ProteinID:
XP_046921936
LinkDB
All DBs
Position
Unknown
AA seq
1919 aa
AA seq
DB search
MPFICSLSGDNGIMGCHEIPPLKEQGRECCLSKDDVYDFGAGRQDLNASGLCVNWNRYYN
VCRTGSANPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIV
GSFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSSSTVASYAEPGDCYEEIFQYVCH
ILRKARRRALGLYQALQSRRRAPGPGASPSAKPGPRAKEPRHYKLCPRHSPLDPMPHTPV
QPISAMLASDPASCPRCQHEGSRRPSGPGSTDSGQEGSGSGGSGGDSEEVDGDGARSSED
GTSSGLEKEDEEEQADGAARLCGDVWRETRAKLRGIVDSKYFNRGIMMAILVNTVSMGIE
HHEQPEELTNILEICNVVFTSMFALEMLLKLAAFGLFDYLRNPYNIFDSIIVIISIWEIV
GQADGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILG
MHIFGCKFSLRTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWASL
YFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSDEDQSSSNMEEFDKLQEGLDSGGD
PKICPIPMTPNGHLDPSLPLGGHLGPPGAAAPAPRLSLQPDPVLVALGSRKSSVMSLGRM
SCDQRSLSSSRSSYYGPWGRSGAWASRRSSWNSLKHKPQSAEHESLLSAERGGGPRACEG
PRDEGPPRAAPLHAPHAHHVHHGPHPAHRHRHHRRTLSLDTRDSMDLAELVPAVGAHPRA
TWRAVGPAPGHEDCNGRMPSIAKDVFTKMDDRRDRGEDEEEMDYTLCFRVRKMIDVYKPD
WCEVREDWSVYLFSPENRFRVLCQTIIAHKLFDYVVLAFIFLNCITIALERPQIEAGSTE
RIFLTVSNYIFTAIFVGEMTLKVVSLGLYFGEQAYLRSSWNVLDGFLVFVSIIDIVVSVA
SAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLKPIGNIVLICCAFFIIF
GILGVQLFKGKFYHCLGVDTRNITNRSDCVAANYRWVHHKYNFDNLGQALMSLFVLASKD
GWVNIMYNGLDAVAVDQQPVPNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQH
QEAEEARRREEKRLRRLEKKRRKAQRLPYYATYCPTRLLIHSMCTSHYLDIFITFIICLN
VVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVLKLVAFGLRRFFKDRWNQLDLAIVL
LSVMGITLEEIEINAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVG
NLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGMSRHATFENFGMAFLTLFQVSTGDNW
NGIMKDTLRDCTHDERSCLSSLQFVSPLYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEA
QEDAEMDAELELEMAHGLGPSPRPPTNSPGAPGRGPGGPGGGGDAEGRLCRRCYSPAQEN
LWLDSVSLIIKDSLEGELTIIDNLSGSIFHHYSSPAGCEKCHHDKQEVQLAETEAFSLNS
DKSSSILLGDDLSLEGPTACPLGPKDSRGEPDAPEPMHGGEGGECFFPLPNTAVSSDPEN
FLWERETVPSNPVRSWLKHESGRAAPLPPFSPDASSPLLPMPAEFFHPAVSASQKGQEKV
AGAGTLPKIALQGSWASLRSPNVNCTLLRQATGSDTSLEASRSSSAGSLQTTLEDSLTLS
DSPRRALGPPAPALGPRAGLSPAARRRLSLRGRGLFTLRGLRAHQRSHSSGGSTSPGCTH
HDSMDPSDEEGAGGRGGAGGGGAGSEHSETLSSLSLTSLFGPPPPPPGLTPARRFSSTSS
LAAGPGRPRAPSRPRGLARSPSWAADRSKDAPGPAPSRPELPPAPGELQPGEAASKRKR
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcatctgctccctttcgggggacaatggcatcatgggctgccacgagatcccc
ccactcaaggagcagggccgtgagtgctgcctgtccaaggatgatgtctacgacttcggg
gcggggcgccaggacctcaatgccagcgggctctgcgtcaactggaaccgctactataac
gtgtgccgcacgggcagcgccaacccccacaagggtgccatcaatttcgacaacatcggc
tacgcctggatcgtcatcttccaggtgattaccctggaaggctgggtggagatcatgtac
tatgtgatggatgctcactccttctacaacttcatctactttatcctgcttatcatagtg
ggctccttcttcatgatcaacctgtgcctcgttgtcatagcgacccagttctcggagacc
aagcagcgggagcaccggctgatgctggagcagcggcagcgctacctgtcctccagcacg
gtggccagctacgcggagcccggcgactgttacgaggagatcttccagtacgtctgtcac
atcttgcgcaaggccaggaggcgtgccctgggcctctaccaggccctgcagagccggcgc
cgggccccgggcccgggggcgtccccctccgccaagcccgggccccgcgccaaggagccc
aggcattacaagctgtgccctcgacacagtcccctggacccgatgccccacacaccggtg
cagcccatctctgccatgctggcctccgatcctgccagctgtccccgctgccagcacgag
gggagccggcggccctcgggcccgggcagcaccgactcgggccaggagggctcgggctct
ggtggctcaggtggtgactcggaggaggtggatggggacggggcccggagcagcgaggat
gggacctcctcaggcctggagaaggaggacgaggaggaacaggcggacggggcggcccgg
ctgtgcggggatgtgtggcgggagacccgagccaagcttcgaggcatcgtggacagcaag
tacttcaaccggggcatcatgatggccatcttggttaacaccgtcagcatgggcatcgaa
caccatgagcagcctgaggagctgaccaacatcctagagatctgtaacgtcgtcttcacc
agcatgttcgccctggagatgctcctgaagctggccgccttcgggctcttcgactacttg
cgcaacccctacaacatcttcgacagcatcatcgtcatcatcagcatctgggagattgtg
gggcaggcggacggcggcctgtcggtgctgcggaccttccggctgctgcgggtgctcaag
ctggtgcgtttcatgcccgcgctgcggcgccagctggtggtgctcatgaagaccatggac
aacgtggccaccttctgcatgctgctcatgctcttcatcttcatcttcagcatcctcggg
atgcacatctttggctgcaaattcagcctccgcacggacacaggagacacggtccccgac
aggaagaactttgactccctgctgtgggccatcgtcacagtgttccagatcctcacccag
gaggactggaacgttgtcctctacaatggcatggcctctacctccccctgggcctccctc
tactttgtcgccctcatgaccttcggcaactatgtgctcttcaaccttctggtggccatc
ttggtggagggtttccaggcagagggtgacgccaatcgctcctactcggacgaggaccag
agctcatccaacatggaggagttcgacaagcttcaggagggcctggatagcggcggagat
cccaagatctgcccaatccccatgacccccaatgggcacctggaccccagtctcccactg
ggtggacatctgggcccccccggggctgcggcacccgccccccgcctctcgctgcagccg
gaccccgtcctggtggccctgggctcccgcaagagcagcgtcatgtcactggggaggatg
agctgtgaccagcgctccctgtccagctcccggagctcctactacgggccgtggggccgc
agcggggcctgggccagccgccgctccagctggaacagcctcaagcacaagccgcagtcg
gcggagcacgagtccctgctctcggcggagcgcggtggcggtccccgggcctgcgagggc
cccagggacgagggcccgccgcgggctgcgccgttgcacgctccgcacgcccaccacgtg
caccacggtccccacccggcgcaccggcaccgccaccaccgccggacgctgtccctcgac
accagagactcgatggacctggccgagctggtgcccgccgtgggcgcccacccccgggcg
acctggagggcggtggggccggcccccgggcacgaggactgcaatggcaggatgcccagc
atcgccaaggatgtcttcaccaaaatggacgaccgccgggatcgcggggaggacgaggag
gagatggactacaccctgtgcttccgcgtccgcaagatgatcgacgtctataagcctgac
tggtgcgaggtccgcgaggactggtctgtctacctcttctcccctgagaacaggttccga
gtcctgtgtcagaccatcattgcccacaagctcttcgactatgtggtcctggccttcatc
tttctcaactgcatcaccatcgccctggagaggccccagatcgaggccggcagcaccgaa
cgtatcttcctcactgtgtcgaactacatcttcacagccatcttcgtgggcgagatgacg
ctgaaggttgtctcgctgggcctgtactttggcgagcaggcgtacttgcgtagtagctgg
aacgtgctggatggctttctcgtcttcgtgtcgatcattgacatagtggtgtctgtggcc
tcagccgggggagccaagatcctaggggtccttcgagtcctgcggctcctgcgcacccta
cggcccctgcgtgtcatcagccgagcgcctggtctgaagctggtggtggagacgctcatc
tcttccctcaagcccattggcaacatcgtcctcatctgctgtgccttcttcatcatcttt
ggcatcctgggggtgcagctcttcaagggcaagttctaccactgtctgggtgtggacacc
cgcaacatcaccaaccgctctgactgcgtggctgccaactaccgctgggtccaccacaag
tacaactttgacaacctgggccaggccctgatgtccctctttgtcctggcctccaaggat
ggctgggtgaacatcatgtacaacggactggatgctgtcgcggtggaccagcagccggtg
cccaaccacaacccctggatgctgctctacttcatctccttcctgctcatcgtcagcttc
ttcgtgctcaacatgttcgtgggcgtcgtggtggagaacttccacaagtgccggcagcac
caggaggccgaggaggcgcggcggcgcgaggagaagcggctgcggcgcctggagaagaag
cgccggaaggcccagcgtctgccctactatgccacctattgtcccacccggctgctcatc
cactccatgtgtaccagccactacctggacatcttcatcaccttcatcatctgcctcaat
gtggtcaccatgtccctggagcactacaaccagcccacgtccctggagacagccctcaag
tattgcaactacatgttcaccaccgtgtttgtgctggaggctgtgctgaagctggtggcg
tttgggctgaggcgcttcttcaaggaccggtggaaccagctggacctggccattgtgctg
ctgtcggtcatgggcatcacgctggaggagattgagatcaacgcggcactgcccatcaac
cccaccatcatccgcatcatgcgggttctgcgcatcgctcgggtgctgaagctgctgaag
atggccacggggatgcgggccctgctggacaccgtggtgcaagctctgccccaggtgggc
aacctgggccttctcttcatgctgcttttctttatctacgccgccctcggcgtggagctc
ttcgggaagctggtctgcaatgacgagaacccatgcgagggcatgagccggcacgctacc
ttcgagaacttcggcatggccttcctcacactcttccaggtctcgactggcgataactgg
aatgggatcatgaaggacactctgcgggactgcacccacgatgagcgcagctgcctgagc
agcctgcagtttgtgtcaccgctgtacttcgtcagcttcgtgctcacggcccagttcgtg
ctcatcaacgtggtggtggccgtgctcatgaagcacctggacgacagcaacaaggaggcc
caggaggacgccgagatggacgccgagctggagctcgagatggcccacggcctgggtccc
agcccgcggccgcccaccaactccccgggggcgcctggccgaggcccgggcgggccgggc
ggcgggggtgacgccgagggccgcctgtgccggcgctgctactctccggcccaggagaac
ctgtggctggacagcgtctctttaatcatcaaggactccttggagggggagctgaccatc
attgacaacctgtccggttccatcttccatcactactcctcgccggccggctgcgagaag
tgtcaccacgacaagcaagaggtgcagctggccgagacggaggccttctccctgaactca
gacaagtcctcctccatcctgctgggtgatgacctgagtctggagggccccacggcctgc
ccactcggccccaaagacagcaggggtgagccggatgcccctgagcccatgcacggagga
gaggggggcgaatgcttcttccccttgcccaacacggccgtctcgtcggatcctgagaac
ttcctgtgggagagggagactgtcccatccaaccccgtccggtcctggctgaaacatgag
agcggccgagctgcacccctgcctcccttctccccggatgcctccagcccgctcctgccc
atgcctgcggagttcttccaccctgctgtgtctgccagccagaaagggcaggagaaggtg
gctggcgctgggacgctccccaagattgccctgcagggctcctgggcatccctgcggtcg
ccgaatgtcaactgcaccctcctccggcaggccacggggagcgacacgtcgttggaggcc
agccgcagcagctcggccggcagcctgcagaccacgctggaggacagcctgaccctgagc
gacagtccccggcgcgccctggggcccccggcccccgcactgggcccgcgggccggcctg
tcgcccgccgcccgccgccgcctcagcctgcggggccggggcctgttcaccctgcgcggg
ctgcgggcgcaccagcgcagccacagcagcggcggctccaccagcccgggctgcacccac
cacgactccatggacccctcggacgaggagggcgcgggcggccggggcggcgcgggcggc
gggggcgcgggcagcgagcactcggagaccctcagcagcctgtcgctcacgtccctcttc
gggccgccgcccccgccgccggggctcacgcccgcccgcaggttcagcagcaccagcagc
ctggccgccggccccggccgcccgcgcgccccctcgcggccccgcggcctggcccggagc
ccctcctgggccgccgaccgcagcaaggacgcgccgggcccggccccctcgcggcccgag
ctgccgcccgccccgggagagctgcagccgggggaggccgccagcaagaggaagagatga
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