Entry |
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Name |
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
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KO |
K18412 | trinucleotide repeat-containing gene 6 protein |
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Organism |
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Brite |
KEGG Orthology (KO) [BR:lruf00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:lruf03019]
124501708
03036 Chromosome and associated proteins [BR:lruf03036]
124501708
Messenger RNA biogenesis [BR:lruf03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124501708
Chromosome and associated proteins [BR:lruf03036]
Eukaryotic type
Gene silencing
piRNA pathway
124501708
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
1835 aa
MGLIVPFVEVALSRSLIFQVNKPSGMVEQEDFVMEGHGKTPPPGEESKQYIHGTTEKEQE
REEQLMEDKKRKKEDKKKKEATQKVTEQKTKVPEVTKPSLSQPTAASPIGSSPSPPVNGG
NNAKRVAVPNGQPPSAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPP
TAPGANSNNAQVTGTLLQSDGGTAPESTLGGAAASNYANSTWGPGASSNNGASPNPIHIW
DKVIVDGSDMEEWPCIASKDTESSSENTTDNNSASNPGSEKSTLPGSTTSNKGKGSQCQS
ASSGNECNLGVWKSDPKTKSVQSSNSTTESNNGLGNWRNVSGQDRIGPGSGFSNFNPNSN
PSAWPALVQEGNPRKGALETDTSNSSAQVSTVGQASREQQSKMENAGVNFVVSGREQAQI
HNTDGPKNGNTNSLNLSSPNPMENKGMPFGMGLANASRSTDAPSQSTGDRKTGSVGSWGA
ARGPSGTDTASGQSNSGNNGNNGKDREDSWKGASVQKSTGSKNDSWDNNNRSTGGSWNFG
PQDSNDNKWGEGNKMTSGVSQGEWKQPTGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLP
ENQGNAQAPCWGRSSSSTGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTL
LSRTDLDPRVLSNTGWGQTQIKQDTVWDIEEVPRPEGKSDKGTEGWESAATQTKNSGGWG
DAPSQSNQMKSGWGELSASTEWKDPKNTGGWNDYKNNNSSNWGGGRPDEKPSSSWNENSS
KDQGWGGGRQPNQGWTSGKNGWGEEVDQAKNSSWESPASKPVSGWGEGGQNEIGTWGNSG
NTSLASKGGWEDCKRSPAWTETGRQPNSWNKQHQQQQQPQQPPPPQPEASGSWGGPPPAP
PGNGRPSNSNWSSGPQPVTPKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPNSYNYKNV
NLWDKNSQGGPAPREPNLPTPMTSKSASVWSKSTPPAPDNGTSAWGEPNESSPGWGEMDD
TGASTTGWGNAPSNAPNAMKPNSKSMQDGWGESDGPVTGTRHPSWEEEDDGGVWNTAGSQ
GSASSHNSASWGQGGKKQMKCSLKGGNNDSWMNPLAKQFSNMGLLSQTEDNPSSKMDLSV
GSLPDKKFDVDKRAMNLGDFNDIMRKDRSGFRPPNSKDMGTTDSGPYFEKGGNHGLFGNS
TAQSRGMHTPVQPLNSSPNLRAQVPPQFISPQVSASMLKQFPNSGLNPGLFNVGPQLSPQ
QIAMLSQLPQIPQFQLACQLLLQQQQQQQLLQNQRKLSQAVRQQQEQQLARMVSALQQQQ
QQQQQQQQQQRQPGMKHSPSHPVGPKPHLDNMVPNALNVGLPDLQTKGPIPGYGSGFSSG
GMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQEANMHKNGAIVAPGKTRGGSPYNQFD
IIPSDTLGGHTGPAGDSWLPAKSPPTNKIGSKSSNASWPPEFQPGVPWKGIQNIDPESDP
YVTPGSVLGGTATSPIVDTDHQLLRDNTTGSNSSLNTSLPSPGAWPYSASDNSFTNVHST
SAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISSRNTTPLPRPPPGLTNPKPSSPWSSTA
PRSVRGWGTQDSRLASASTWSDGGSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFH
LNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTTILAEFATDDEVSRFLAQAQPPTPAAT
PSAPAAGWQSLETGQTQSDPVGPALNLFGGSTGLGQWSSSAGGSSGADLAGASLWGPPNY
SSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDSI |
NT seq |
5508 nt +upstreamnt +downstreamnt
atgggactaatagtcccctttgtggaggtagctctatctcggtcactgatcttccaggtc
aataagccatctggaatggtggaacaggaggattttgtaatggaagggcatggcaagact
ccacctcctggtgaagaaagcaaacagtacatacatggcactacagagaaggagcaagaa
agggaagaacagttaatggaagacaagaaaaggaagaaagaggataaaaagaaaaaagaa
gccactcagaaggtcacggaacaaaaaaccaaagtgcccgaagtgacgaaaccaagttta
agccaaccaacggccgccagcccaattggcagctctccatcgccaccagtcaatggtggc
aacaatgccaaaagggtggcagtgccgaacggacaaccgccaagcgccgcccgctacatg
cctcgggaggtgccgccgcgattccgttgccagcaggaccacaaagtgttactaaaacgt
gggcagccccctccaccatcctgcatgctcctcgggggcggggcagggcctcctcccccc
acggcacccggagcaaactccaacaacgcacaagtgacaggaacgctgctgcagagtgac
ggtgggactgcaccagagtcaacccttggaggtgctgctgcttcaaattatgcaaattcc
acttggggcccgggagcctcctccaacaacggcgcctcccccaacccaattcacatctgg
gacaaggtgattgtagacgggtctgacatggaagagtggccttgtatcgccagcaaagac
actgagtcttcttccgaaaacaccaccgataacaacagtgcctcgaaccctggctctgag
aagagcactctgccaggaagcaccactagtaacaaaggaaaagggagccagtgccagtct
gcaagttctgggaacgaatgtaatcttggggtctggaaatctgaccctaagactaaatct
gttcaatcttccaactctactacagagagcaacaatggactaggaaattggaggaatgtg
agtggtcaggatagaattggacctggctctggcttcagcaactttaacccaaatagcaac
ccatctgcctggccagcgctggtccaagaaggaaatcctaggaaaggggcattggaaacg
gatactagtaattccagtgcacaggttagcacagtaggtcaggcatccagggaacagcag
tcaaagatggaaaatgcgggtgttaattttgttgtctctggcagagaacaggctcaaatt
cataacactgatggaccaaaaaatggaaacactaactccttgaacttaagttcaccaaac
cccatggagaataagggaatgccctttggaatgggcttggcgaacgcctccaggagcact
gatgccccttcacaaagcactggagatcgaaagactgggagtgttggatcttggggtgca
gctagggggccttctggaactgacacagcctctggacaaagcaattctggaaacaatggg
aacaatggaaaggatagagaggactcctggaaaggagcctctgttcagaaatcaactggg
tcaaaaaatgactcttgggacaacaataacaggtctacgggtgggtcctggaactttggc
cctcaggactctaatgacaacaaatggggtgaagggaacaaaatgacatctggggtctct
cagggagaatggaaacagccgactgggtctgatgagttgaaaattggagaatggagtggt
ccaaaccaaccaaattctagcactggagcatgggacaatcaaaagggccaccccctccct
gaaaaccaaggcaatgcccaggctccctgttggggaagatcttccagctccacaggaagt
gaagttggaggtcaaagcactggaagcaaccacaaagcaggaagtagtgacagtcataat
tctggccgtcggtcataccggcccacacatcctgattgtcaggctgtcttacagactctt
ttgagccgaactgatttggaccccagggtgctctcaaacactggctggggccaaactcaa
attaagcaggacacggtgtgggatatcgaagaggtgccaaggcctgaggggaaatctgac
aaaggaactgaggggtgggagagcgctgccacacagaccaagaactcagggggctgggga
gatgcacccagccaaagcaatcaaatgaagtctggatggggggagctctcagcctctaca
gagtggaaagaccccaagaacacaggaggctggaatgactacaagaacaacaactcttcc
aactggggaggcggccgaccagatgaaaagccatcttcctcttggaatgagaactccagc
aaggatcaggggtggggagggggacgccagcccaatcaaggatggacttctgggaagaat
ggttggggagaggaagtcgaccaggcgaaaaacagcagttgggaaagtcctgcaagtaaa
cccgtgtctgggtggggcgaaggagggcagaacgaaatcggaacttgggggaacagtggg
aatacaagcctagcttccaaaggcgggtgggaagattgcaaaaggtctccagcatggacc
gagacaggcagacagcccaattcctggaataaacagcaccaacagcagcagcagccacag
cagccaccgccaccacaaccagaggcttctggttcatggggaggcccacccccagcacct
ccaggcaacggacgaccttccaattccaactggagcagcgggccacagccagtaacccct
aaggatgaggaacccagtggttgggaagagccatccccacagtcaattagtcggaaaatg
gacatcgatgatggcacttccgcatggggagaccctaacagttataactacaagaatgtg
aatctgtgggataagaattcccaagggggcccagcacctcgagaaccaaacctgcccacc
ccgatgaccagtaaatcagcatcagtctggagcaaaagcacaccacctgctccagataat
ggtacttcagcttggggtgagccaaatgaaagcagtcctgggtggggcgaaatggacgac
actggagcatcgaccacgggctgggggaacgcaccctccaacgctccaaatgccatgaaa
cctaattccaaatctatgcaagatggctggggggagagtgacggtccagtgacgggaact
cgccatcccagctgggaagaggaggacgatggaggagtctggaacaccgccggctctcag
ggaagtgcttcctcccacaactcagcaagctggggacaaggaggaaagaagcagatgaag
tgttcactgaaaggaggaaacaatgattcatggatgaatcctcttgccaaacagttttca
aatatgggattgctgagtcaaactgaagataatccaagcagcaaaatggatttgtctgta
gggagccttccagataaaaaatttgacgtggacaagagagcgatgaatctcggggatttt
aatgatatcatgaggaaggatcgatctgggttccgtccacctaattccaaagacatggga
accacagatagtgggccttattttgagaagggtggcaatcatggtttgtttggaaatagc
acagcacaatcgagaggtatgcacacgccagtgcagccgctaaattcttctcctaatctc
cgggcgcaagtgcctccccagtttatttccccccaggtttctgcctcaatgctcaagcag
tttcccaacagtggcctgaatccaggtcttttcaatgtggggccccagttatctcctcaa
caaattgccatgctgagccagcttccacaaattccccagtttcagttggcatgtcagctt
ctcctgcagcagcagcagcaacagcagttgctacagaaccagaggaagctttctcaagct
gtgcgccagcagcaagagcagcagctggctcgaatggtgagcgctctccagcagcaacag
cagcagcagcagcagcagcagcagcagcagaggcagcccggcatgaagcactcgccctct
catcccgttgggcccaagccgcatctggacaacatggtacccaacgctctgaatgtgggg
ctcccagaccttcaaaccaaagggccaatacctggatatggttctggcttcagctctggc
ggcatggactatggcatggttggtgggaaggaggctggaacagagtctcgctttaaacag
tggacctccatgatggagggactgccctctgtagccacacaggaagccaatatgcacaaa
aatggcgctatagtggcccctggtaagactcgaggagggtcaccatacaaccagtttgat
atcatcccgagtgacacactgggtggccatacgggtcctgctggtgatagctggttacct
gccaaatctccaccaacaaataaaatcggaagtaaatccagcaatgccagttggcctcca
gaattccaaccaggagtgccatggaaaggtatccaaaacattgaccctgaatctgacccc
tatgtcaccccaggaagtgtgctggggggtacagccacatctcccattgtagatactgac
caccaacttctgcgggataacaccacagggtctaattcttccctcaacacctcgctgcct
tcacctggtgcctggccctacagtgcctctgacaactcctttaccaacgttcatagcact
tcagcaaagttccctgattacaaatcaacatggtccccagatcccataggacacaacccc
actcatctctccaacaagatgtggaaaaaccatatttcctcaaggaacactacaccgctg
ccccgcccacctcctggtctgaccaaccccaaaccatcatctccctggagcagcacagca
ccccgatcggtcaggggttgggggacacaggactcacggcttgcctcagcctctacttgg
agtgatggtggttcagttcgtcccagttactggctggttcttcacaatctcactccacag
attgatgggtcaacgttgagaaccatctgcatgcagcatggcccactgctgacattccat
ctgaacctaacccagggcactgccctgatccgatacagcaccaaacaggaggcagccaag
gcccagactgcactgcacatgtgtgtgttgggaaacactaccatcctggctgagtttgcc
accgatgatgaagtcagccgctttctggcacaagctcagccccctacacctgcagcaacc
ccaagtgcacccgccgcaggttggcagtcgctggagaccggccagacccagtcagatccc
gtcggacctgctttgaatcttttcggtgggtccacagggctcgggcagtggagcagcagt
gctggcggcagcagcggggccgatcttgctggcgcttcgttgtgggggcccccaaactat
tcttctagcttgtggggagtcccaactgtggaagatccccataggatgggcagccctgct
cccttactacctggtgaccttctgggaggagggtcggattcaatctga |