Lynx rufus (bobcat): 124501783 Help Entry 124501783         CDS       T08475                                  Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism lruf  Lynx rufus (bobcat) Pathway lruf04151   PI3K-Akt signaling pathway lruf04510   Focal adhesion lruf04512   ECM-receptor interaction lruf04974   Protein digestion and absorption lruf05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:lruf00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     124501783   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     124501783  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     124501783  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     124501783  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     124501783  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:lruf00536]     124501783 Glycosaminoglycan binding proteins [BR:lruf00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    124501783 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  124501783 NCBI-ProteinID:  XP_046922201 LinkDB All DBs Position Unknown AA seq 1487 aa AA seqDB search MIRLGAPQTLVLLTLLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGQPGPKGQKGEPGDIKDIVGPKG PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG APGPAGEEGKRGARGEPGGAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPG DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG PVGPPGLTGPSGEPGREGSPGADGPPGRDGAAGVKGDRGETGPVGAPGAPGPPGSPGPAG PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQG LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQAAGNLRQHDAEVDATLK SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG ETCVYPNPASVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK HTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL NT seq 4464 nt NT seq  +upstreamnt  +downstreamnt atgatccgcctcggggctccccagacgctggtgctgctgacgctgcttgtcgccgctgtc cttcggtgtcacggccaggatgtccagaaggctggcagctgtgtgcaggacgggcagagg tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg actgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccctgagacc cccttcggagagtgctgccccatctgctcaactgacctcgccactgccagtgggcaacca ggaccaaagggacagaaaggagaacccggagacattaaggatattgtaggacccaaagga cctcctgggcctcagggacctgcaggtgaacaaggacccagaggggatcgtggcgacaaa ggtgaaaaaggtgcccctggaccgcgtggcagagacggagagcctgggacccctggaaat cccggcccccctggtcctcctggcccccctggcccccctggcctcggtggaaactttgct gcccagatggctggaggatttgatgagaaggctggtggtgcccagatgggagtgatgcaa gggccaatgggccccatgggacctcgagggcctccaggccctgctggtgctcccggacct caaggatttcaaggcaaccctggagaacctggggaacccggtgtctctggtcccatgggt ccccgcggtcctcctggcccccccggaaagcctggcgatgatggtgaagccggaaagcct ggaaaatctggtgaaagaggccctcctggccctcagggtgctcgcggcttcccgggaacc ccaggccttcctggtgtcaagggtcacagaggctacccaggtctagatggtgctaaggga gaagctggtgctccaggtgtgaagggtgagagtggttcaccgggtgagaatggttctccg ggcccaatgggtccccgcggcctgcctggtgagagaggacggactggccctgctggggct gcgggtgcccggggcaacgacggtcaaccaggccctgctgggcctccgggtcccgtgggt cctgctggcggtcctggcttccctggtgctcccggtgctaagggtgaagctggccccact ggtgctcgaggccccgaaggcgctcaaggtcctcgcggtgaacctggtactcctgggtcc cctggaccggccggtgcctctggtaaccctggaactgatggaattcctggagccaaaggg tctgctggtgctccgggcatcgctggtgctcccggcttccctgggccccgtggtccacct ggccctcaaggtgcaactggtccgctgggcccgaaaggtcagacgggtgagcctggtatt gctggcttcaaaggcgaacaaggccccaagggagagcctggccctgctggcccccaagga gcccctggtcctgccggtgaggaaggcaagagaggtgcccgtggagagcctggtggtgct gggcccgttggtccccctggagaaagaggtgctcctggcaaccgtggcttcccaggtcaa gatggtctggcaggtccaaagggagcccctggagagagagggcccagcggccttgctggc cccaagggtgccaacggcgatcctggccgtcccggagagcctggccttcctggagcccgg ggtctcactggacgccccggtgatgctggtcctcaaggcaaagttggtccttctggagcc cctggtgaagatggtcgtcctggacctccaggtcctcagggtgctcgtgggcagcctggc gtcatgggtttccccggccccaaaggtgccaatggcgaacctggcaaggctggtgagaag ggactgcccggtgcccctggactgagaggtcttcccggcaaagatggtgagaccggtgct gcggggccccccggacccgctggacctgccggtgaacgaggcgagcagggtgcccctggg ccatctgggttccagggacttcctggccctcccggtcccccaggtgaaggtggaaagcca ggtgaccagggtgttcctggtgaagctggagcccccggcctcgtgggtcccaggggtgaa cgaggtttcccaggtgaacgtggctctcccggtgcccagggcctccagggtccccgcggc ctccctggcactcctggcacggacggccccaaaggcgcatctggcccagccggcccccct ggggctcagggccctccaggtctgcaggggatgcccggtgagaggggagcagctggcatc gctgggcccaagggagacaggggtgacgttggtgagaaaggccccgagggagcccctggg aaggacggtggacgaggcctgactggtcccattggcccccctggccctgccggtgccaat ggtgagaagggagaagttggacctcctggtcctgcgggaactgctggtgctcgtggagcc ccgggtgaacgtggagagaccggcccccccgggcccgctggattcgcaggacctcccggt gctgatggccagccaggtgccaagggcgagcaaggagaggctggccagaaaggtgatgct ggtgccccgggtcctcagggtccctctggagctcctggacctcagggtcctactggtgtg actggtcctaaaggagcccgaggtgctcaaggccccccgggagccactggattccctgga gctgctggccgtgtcggacccccaggctccaatggcaaccctggaccccctggtccccct ggtccttctggaaaagatggtcctaaaggtgctcgaggagacagcggcccccctggccgt gctggcgaccctggcctccaaggtcctgccgggccccctggcgagaagggagagcctgga gatgatggtccctctggtcccgatggtcctccaggtccccaaggtctggctggtcaaagg ggcattgttggtcttcctgggcaacgtggtgagagaggattccccggcctgcctggccca tcgggtgagcctggcaagcagggagctcccggagcatctggagaccgaggtccccccggc cccgtgggtcctcctggcctgactggtccttctggcgaacctggacgagagggaagccct ggtgctgatggcccccctggcagagatggtgcggctggagtcaagggtgatcgtggtgag actggtcccgtgggtgctcctggagcccccgggccccctggctctcctggccccgctggc ccaactggaaagcagggagaccgaggagaagctggcgcacaaggccccatgggccctgca ggaccagccggagcccggggaatcccaggtcctcaaggtccccgaggtgacaaaggagaa gctggagaggctggcgagaggggcctgaagggacaccgtggcttcactggtctgcagggt ctgcccggccctcctggtccttctggagaccaaggtgcttctggtcctgctggtccttct ggccctagaggtcctcctggtcccgtcggtccctctggcaaagatggtgctaatggaatc cctggccccattggacctcctggtccccgcggacgttcaggcgaaactggcccagctggt cctcctggaaaccccggaccccctggccctccaggtccccctggccctggcatcgacatg tctgcctttgctggcctaggccagagagagaagggccccgaccccctgcagtacatgcgg gctgaccaggcagctggcaacctgagacagcacgacgccgaggtggatgccacgctcaag tccctcaacaaccagattgagagcatccgcagccccgagggctcccgcaagaaccccgct cgcacctgccgggacctgaaactctgccaccctgaatggaagagcggagactactggatt gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagactggc gagacctgcgtctaccccaacccagcgagtgttcccaagaagaactggtggagcagcaag agcaaggacaagaagcacatctggttcggggaaaccatcaacggtggcttccacttcagc tatggagatgacaacctggctcccaacactgccaacgtccagatgaccttcctacgcctg ctgtccaccgagggctcccagaatatcacctaccactgcaagaacagcattgcctacctg gatgaagcggctggcaacctcaagaaggccctgctcatccagggctccaatgatgtggag atccgggctgagggcaacagcaggttcacatatactgtcctgaaggatggctgcacgaaa cacaccggtaagtggggcaagactatgatcgagtaccggtcacagaagacctcacgtctc cccatcattgacattgcacccatggacataggagggcctgagcaggaatttggtgtggac atagggcctgtctgcttcttgtaa

DBGET integrated database retrieval system