Lynx rufus (bobcat): 124501795
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Entry
124501795 CDS
T08475
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B
KO
K12821
pre-mRNA-processing factor 40
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124501795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lruf03041
]
124501795
Spliceosome [BR:
lruf03041
]
Complex A
U1 snRNP components
U1 related factors
124501795
Complex B
124501795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
DTW
Motif
Other DBs
NCBI-GeneID:
124501795
NCBI-ProteinID:
XP_046922218
LinkDB
All DBs
Position
Unknown
AA seq
865 aa
AA seq
DB search
MMPPPFMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGIMPPMLPPMGAPPPLTQIPGMVP
PMMPGMLMPAVPVTAATAPGADTASSAVAGTGPPRALWSEHVAPDGRIYYYNADDKQSVW
EKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEALVQQEAAG
KQQPQPPQPQPEPPPVPPGPTPMPLGLLEPEPGGSEDCDMSEAAQPVEQGFLQQPEEGPS
SAAGQHQPPQQEEEESKPEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVV
TDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRY
RRAEQTFGELEVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSS
VNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLRE
RRQQRKNREAFQTFLDELHETGQLHSMSTWMELYPAVSTDVRFANMLGQPGSTPLDLFKF
YVEELKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNS
LLEKAEAREREREKEEARRMRRREAAFRSMLRQAVPALELGTAWEEVRERFVCDSAFEQI
TLESERIRLFREFLQVLETECQHLHTKGRKHGRKGKKHHRKRSHSPSGSESEEEELPPPS
LRPPKRRRRNPSESGSEPSSSLDSVESGGAALGGRGSPSSRLLLGSDHGLRKAKKPKKKT
KKRRHKSNSPESETDPEEKAGKESDEKEPEQDKDRELRRAELPNRSPGFGIKKEKTGWDT
SESELSEGELERRRRTLLQQLDDHQ
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaccacccttcatgccccctccaggaatccccccaccctttcctccgatggga
ctacctcccatgagtcagagaccgccagccatccccccaatgccacctggcatcatgccc
ccaatgcttccaccaatgggggcgccaccaccactcacacagataccaggaatggtacct
cccatgatgccaggaatgctgatgccagcggtgcctgtcaccgcagcgacggctccgggt
gcggacacagccagctctgctgtggctgggacaggccctccgagggccctgtggagtgag
catgtggcccctgatgggcgcatctactactacaatgctgacgacaagcagtccgtgtgg
gagaagcccagcgtgctcaagtccaaggcagagttgctgctgtctcagtgtccctggaaa
gagtacaagtcagacacgggcaaaccttactactataacaaccagagtaaggagtctcgc
tggacccggcccaaggacctggatgacctggaggctctagtccaacaagaggctgcaggg
aagcagcagccgcagccacctcagccccagcctgagcccccacctgtgccgcccggcccc
acccctatgcctctgggccttctagagcctgagccaggtggcagtgaagattgcgatatg
tcagaggctgcccagcctgtggagcaagggtttctgcagcagccggaggagggccccagc
agtgctgctggacagcatcagccaccgcagcaggaggaagaggaatcaaagccagaacca
gagaggtctggcctcagttggagcaaccgggagaaagcaaagcaggccttcaaggagctg
ctgagggacaaggctgtcccctccaacgcctcgtgggaacaggccatgaagatggtggtc
accgacccccgttacagtgccttgcccaaactgagtgagaaaaagcaggcattcaatgcc
tacaaggcgcagcgggagaaggaggagaaggaagaggcccggctaagggccaaggaggcc
aagcagaccttgcagcatttcctggagcagcacgaacgcatgacctctaccacccgctac
cggcgggcagaacagacctttggggagctggaggtatgggctgtggtccctgagagggat
cgaaaagaggtttatgatgatgtcctcttcttcctggccaagaaggagaaggaacaggcc
aagcagctccggcgccgcaacatccaggccctgaagagcatcctggatgggatgagtagt
gtcaacttccaaaccacatggtcccaggcccagcagtacctcatggataaccccagcttt
gctcaggaccaccagctgcagaacatggacaaggaagatgcactgatctgctttgaggag
cacatccgagctttggagagggaggaggaggaggagcgggagcgggcccgccttcgggag
cggcgtcagcaacgcaagaaccgggaggccttccagaccttcctggatgagctgcatgag
acagggcagctgcactccatgtccacctggatggagctgtacccagcggtcagcactgat
gtccgctttgccaacatgctgggccagccgggctccacccctctggacttgttcaagttc
tatgtggaggagttgaaggcacgattccatgatgagaagaagatcattaaggacattctt
aaggaccggggcttctgcgtggaggtgaacacagcctttgaggacttcgcccacgtcata
agctttgacaagagggctgctgcgctggacgcaggcaacatcaagctgaccttcaatagt
ctgctggagaaagcagaggcacgggagagagagcgggagaaggaggaggcgcgaaggatg
cggcgcagggaagctgccttccgaagcatgctgaggcaggccgtgcctgctctggagctg
ggcactgcctgggaagaggtccgtgagcgctttgtgtgcgactcagcctttgagcagatc
accctggagtcggagcggatccggctcttccgggagttcctgcaggtactggagactgaa
tgccagcacctccacaccaaaggccgaaaacatggcagaaagggcaagaagcaccatcga
aagcgttcccattcaccatcaggttctgagtcggaagaggaggagttgcccccgccgtct
ctccgaccccccaaacggagaaggcggaacccctcagagtcaggctctgagccctcttcc
tcacttgattcggttgaaagtgggggtgctgcccttggaggacggggttccccatcttct
cgccttctccttggatcagatcatggccttcggaaagccaagaaaccaaaaaagaaaact
aagaagagaagacacaagtcgaacagtcctgagagcgagacagaccctgaggagaaagct
ggcaaggagagtgatgagaaagaaccagaacaggacaaggacagggagctccggcgggca
gaactccccaaccgctccccaggttttggaatcaagaaggagaagacgggctgggacacg
tcggaaagtgagctgagcgagggtgagctggaaagacggcggcggacactcctgcagcag
ctggatgaccaccagtga
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