Lynx rufus (bobcat): 124501887
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Entry
124501887 CDS
T08475
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04514
Cell adhesion molecule (CAM) interaction
lruf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
124501887
04517 IgSF CAM signaling
124501887
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lruf04515
]
124501887
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lruf00537
]
124501887
Cell adhesion molecules [BR:
lruf04515
]
Immunoglobulin superfamily
Contactins
124501887
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lruf00537
]
Others
124501887
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
F22D3_4_N
VEGFR1-3_N_Ig-like
Ig_5
Pur_ac_phosph_N
C2-set_2
fn3_SORL1
Fn3_ROS1
Interfer-bind
ChitinaseA_N
Ig_J_second
NDNF
Motif
Other DBs
NCBI-GeneID:
124501887
NCBI-ProteinID:
XP_046922300
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MYQIVSEEDKGFGPIFEEQPINTIYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLT
SDRYSMVGGNLVINNPDKQKDAGIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERPEVR
VKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKG
NYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALG
NPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYV
QAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYDVTFENAG
MYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFS
WSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITDPTRI
ILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDSNGE
LLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRG
SDNHSPISKYTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTL
GIGEPSIPSNRIKTDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNNFGYIVAFK
PFDGEEWKKVTVTNPDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLTAVINSAQDA
PSEAPTEVGVKVLSSSEISVHWDHVVEKIVESYQIRYWAAHDKEAAAHRVQVTSQEYSAR
LENLLPDTQYFVEVRACNSAGCGPPSDMIETFTKKAPPSQPPRIISSIRSGSRYIITWDH
VVALSNESTVTGYKVLYRPDGQHDGKLYSTHKHSIEVPIPRDGEYVVEVRAHSDGGDGVV
SQVKISGVSTLSPSLLGLLLPALGILVYLDF
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaaatagtttctgaggaagacaaaggatttggaccaattttcgaagagcagcca
atcaataccatttatccagaggaatcaccagaaggaaaagtttcactaaactgtagggca
cgagccagccctttcccagtttacaaatggagaatgaataatggggatattgacctgaca
agtgatcggtacagtatggtaggaggaaacctggttatcaacaaccctgacaaacagaaa
gatgctggaatatattactgtttggcatcaaataactatgggatggtcagaagcactgaa
gcaaccctgagctttggatatcttgaccctttcccacctgaggagcgtcctgaggtcaga
gtgaaagaagggaagggaatggtgcttctctgtgatcctccctaccattttccagatgac
cttagctaccgctggcttctaaatgaatttcctgtatttatcacaatggataaacgaaga
tttgtgtctcagacaaatggaaatctctacattgcaaatgtcgaggcatcagacaaaggc
aattattcctgctttgtatccagtccttctattacaaagagtgtgttcagcaaatttatc
ccactcattccactacctgaacgaacaacaaaaccatatcctgctgatatcgtagttcag
ttcaaggacatttatgcattgatgggccaaaatgtgacattagagtgttttgcgcttggc
aatcccgttcctgatatccgatggcggaaggtcctagaaccaatgccaagtactgctgag
atcagcacctctggggctgtcctcaagatcttcaatattcagctagaagatgaaggcaca
tatgaatgtgaggctgagaacaatagaggaaaggataaacaccaggcaagaatttatgtt
caagcgtttcctgagtgggtagaacatatcaacgacacagaggtggatataggcagtgac
ctctattggccttgtgtggccacagggaagcccatccctacaatccgatggctgaaaaat
ggatacgcgtatcataaaggggagttgagactgtatgatgtgacttttgaaaatgctggc
atgtaccagtgcatagctgaaaacacacatggagccatatatgcaaatgcggagttgaag
atcttggctttggctccaacttttgaaatgaatcctatgaagaaaaagatcttagctgct
aagggaggaagggtcataattgaatgcaaacctaaagcagcacccaagccaaaattctca
tggagtaaagggacagagtggctcgtcaatagcagcagaatactcatttgggaagacggc
agcttggaaataaataacattacaagaaatgatggaggtatctatacatgctttgcagaa
aataatagagggagggctaataacactggcactcttgttattacagatcccacgcgaatt
atattggccccaattaatgctgatattactgttggagaaaatgctaccatgcagtgtgct
gcgtcctttgatcccgccctggatctcacatttatttggtccttcaatggctatgtgatc
gattttaacaaagagaacattcattaccagcggaattttatgctggattccaatggagaa
ctgctcatccgaaatgcccagctgaagcatgctgggagatacacgtgcactgctcagaca
atcgtggacaattcttcagcttcagctgatcttgttgtgcgaggccctccaggccctcca
ggtggtctgcgaatagaagacattagagccacttctgtggcacttacttggagccgtggt
tcagacaatcatagtcctatatctaaatacactattcagaccaagactattctttcagat
gactggaaagatgcaaagacagatcccccaatcattgaagggaatatggaggcagcaaga
gcggtggatttaataccatggatggagtatgaatttcgtgtggtagcaaccaatacgttg
ggtataggagagcccagtataccatcaaacagaattaaaacagatggtgctgctcctaat
gtggcgccttcagatgtaggaggtggaggtggaagcaacagagagctgaccataacatgg
gtgcctttgtcaagagaataccactacggcaacaattttggttacatagtggcatttaag
ccttttgatggggaagaatggaaaaaagttacagtaactaatccagatactggccgctat
gtccataaagatgagaccatgcgcccttccactgcatttcaagtcaaagttaaggccttc
aacaacaaaggagatggaccttacagcctcacagcagtcattaattcagcacaagacgct
cccagtgaagccccaacagaagtaggtgtaaaagtcttatcatcttctgagatatctgtt
cattgggatcatgttgtagaaaaaattgtggaaagctatcagattcggtattgggctgcc
catgacaaagaagcagctgcacacagagttcaagtcaccagccaagagtactcggccagg
ctggagaaccttctgcccgacacccagtactttgtggaagtcagggcctgcaatagcgca
gggtgtgggcctcccagtgacatgattgagaccttcaccaagaaagcacctccgagccag
cccccaaggatcatcagttccataagatctggttcacgctatataatcacctgggatcat
gtggtagcactatcaaatgaatctacagtgacaggatataaggttctctatagacccgat
ggccagcatgatggcaagctgtattcaactcataaacactccatagaagttccaatcccc
agggatggagagtatgttgtagaggttcgtgcacacagtgatggaggagatggagtagtg
tctcaagtcaaaatttcaggtgtatccaccctatcaccaagccttcttggcttactgctg
cctgcccttggcatccttgtctacctggatttctga
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integrated database retrieval system
