Lynx rufus (bobcat): 124502248
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Entry
124502248 CDS
T08475
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124502248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124502248
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124502248
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124502248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
124502248
NCBI-ProteinID:
XP_046922776
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MVRTDGHTLSEKRNYQVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSMFPHRSEKDMLA
SPSTSGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMS
LHTPPSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSSPSIICMPKQQ
PSRQPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRRE
GSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALPGSSYKDPTSSNDDSKS
NLNTSGKTTSSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGL
LTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSE
YLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWIT
RAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPSTFNYNPAQQAF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggactgatggacatacattatctgagaaaagaaactaccaggtgacaaacagc
atgtttggtgcttcaagaaagaagtttgtagagggggtcgacagtgactaccatgatgaa
aacatgtactacagccagtcttctatgtttccacatcggtcagaaaaagatatgctggca
tcaccatctacgtcaggtcagctgtctcagtttggggcaagtttatacgggcaacaaagt
gcactaggccttccaatgagggggatgagcaacaatacccctcagttaaatcgcagctta
tcacaaggcactcagttaccgagccacgtcacgccaacaacaggggtaccaacaatgtca
cttcacacgcctccatctccaagcaggggtattttgcctatgaatcctaggaatatgatg
aaccactcccaggttggtcagggcattggaattcctagcaggacaaatagcatgagcagt
tcagggttaggtagccccaacagaagctcgccaagcataatatgtatgccaaagcagcag
ccttctcgacagccttttactgtgaacagtatgtctggatttggaatgaacaggaatcag
gcatttggaatgaataactccttatcaagtaacatttttaatggaacagatggaagcgaa
aatgtgacaggattggacctttcagattttccagcgttagcagaccgaaacagaagagaa
ggaagtggtaacccaactccattaataaaccccttggctggaagagctccttatgtggga
atggtaacaaaaccagcaaatgagcaatcccaggacttctcaatacacaatgaagatttt
ccagcattacctggttccagctataaagatccaacgtcaagtaatgatgacagtaaatct
aatttgaatacatctggcaagacaacttcaagtacagatggacccaaattccctggagat
aaaagttcaacaacgcaaaataataaccagcagaaaaaagggatccaggtgttacctgat
ggtcgggttactaacattcctcaagggatggtgacggaccaatttggaatgattggcctg
ttaacatttatcagggcagcagagacagacccaggaatggtacatcttgcattaggaagt
gacttaacaacattaggcctcaatctgaactctcctgaaaatctttaccccaaatttgca
tcaccctgggcatcttcaccttgtcgacctcaagacatagacttccatgttccatctgag
tacttaacgaacattcacattagggataagctggctgcaataaaacttggccgatacgga
gaagaccttctcttctatctctattacatgaatggaggagacgtattacaacttttagct
gcagtagagctttttaaccgtgattggagataccacaaagaagaacgagtatggattacc
agggcaccaggcatggagccaacaatgaaaaccaatacatatgagaggggaacatattac
ttctttgactgtcttaactggaggaaagtagctaaggagtttcatctggaatacgacaaa
ttagaagagcggcctcacctgccatccaccttcaactacaaccctgctcagcaagccttc
taa
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