Lynx rufus (bobcat): 124502339
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Entry
124502339 CDS
T08475
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lruf03041
]
124502339
Enzymes [BR:
lruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124502339
Spliceosome [BR:
lruf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124502339
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
124502339
NCBI-ProteinID:
XP_046922911
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MRGGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVEHP
EVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQC
QGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQ
VQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRC
TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINV
GNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR
RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSS
EDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGG
GGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGS
GYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSGYTAQEYGAGTYGAGSTTSTGRSSQSSSQ
QFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSRK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggaggcggctttggggaccgggaccgggaccgtgaccgtggaggatttggagca
agaggtggcggtggccttcccccgaagaaatttggtaatcctggggagcgtttacgtaaa
aagaagtgggatttgagtgagctccccaagtttgagaagaatttttatgtagagcatccg
gaagtggcaaggctgactccgtatgaggttgatgaactacgccgaaagaaagaaattaca
gtgagagggggggatgtttgtcctaaacctgtgtttgccttccatcacgctaacttccca
caatatgtaatggatgtgttgatggatcaacacttcacagaaccaactccgattcagtgc
cagggatttccgttggctctcagtggccgagatatggtgggcattgcgcagactgggtct
gggaagacattggcgtatttgctgcctgcaattgttcatattaaccaccagccatacttg
gaaaggggagacggcccaatttgtctagttctggctcctacgagagagcttgcccagcaa
gtacagcaggtggctgatgactatggcaaatgttctagattgaagagtacttgcatttat
ggaggtgctcctaaaggtccccagattcgagacttggagagaggtgtcgagatctgtata
gctactcctggacgcctgatagatttcctcgagtcaggaaagacaaatcttcgccgatgt
acttaccttgtactggatgaggccgaccggatgcttgatatgggctttgaacctcagatc
cgtaaaattgttgaccaaatcaggcctgataggcagacactgatgtggagcgcaacctgg
ccaaaagaagtaagacagcttgcagaggatttccttcgtgattacacccagatcaacgtg
ggcaatctggagttgagtgccaaccacaacatcctccagattgtggatgtctgcatggaa
agtgaaaaagaccacaagttgatccaactcatggaggaaataatggctgaaaaggaaaat
aagacaataatatttgtagagacaaagagacgctgtgatgacctcactcgaaggatgcgc
agagatggttggccagctatgtgtatccatggagacaagagtcaaccggaaagagattgg
gtgcttaatgagttccgttcaggaaaggctcccatcctcattgccacagatgtagcctcc
cgtgggctagatgtggaagatgtcaagtttgtgatcaactatgactatccaaacagctct
gaggattatgtgcaccgtattggccgaacagcccgtagcaccaacaagggcactgcctac
accttcttcaccccagggaacctaaagcaggccagagagctgatcaaagtgctggaagag
gctaatcaggctatcaatccaaaactgatgcagctggtggaccacagaggaggcggcgga
ggagggggtaagggaggtcgttctcgataccggaccacttcttctgccaacaatcccaat
ctgatgtatcaggatgagtgtgaccggaggcttcgaggagtcaaggatggtggccggaga
gactctgcgagctatcgggatcgtagtgaaaccgatagagccggttatgctaacggcagt
ggctatggaagtccaaattctgcctttggagcgcaagcaggccaatacacctatggtcaa
ggcacctatggggcagctgcttatggcaccagtggctatacagcccaggaatatggcgct
ggcacttacggggctggtagcaccacctcaactgggagaagttcacagagctctagccag
cagtttagtgggataggccggtctgggcagcagccacagccactgatgtcacaacagttc
gcacagcctccgggagctaccaatatgataggttacatggggcagacggcctatcaatac
ccccctccccctcctcctcctcccccttcacgtaaatga
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