Lynx rufus (bobcat): 124502726
Help
Entry
124502726 CDS
T08475
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lruf03016
]
124502726
Transfer RNA biogenesis [BR:
lruf03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
124502726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
Beta-prop_WDR35_TULP_N
PHC2_SAM_assoc
Herpes_UL37_2
Motif
Other DBs
NCBI-GeneID:
124502726
NCBI-ProteinID:
XP_046923401
LinkDB
All DBs
Position
Unknown
AA seq
1332 aa
AA seq
DB search
MRNLKLLRTLEFRDIQAPGKPQCFSLRTEQRTVLIGSDHGLIEIDPVTREVKNEISLVAE
GFLPEDGSGCIVGIQDLLDQESVCVATASGDVILCNLSTCQLECVGSVASGISIMSWSPD
QELVLLATGQQTLIMMTKDFEPIMEQKIHQDDFGESKFITVGWGRKETQFHGSEGRQAAF
QVQMYELALPWDDHRPQVTWRGDGQFFAVSVVCPETGARKVRVWNREFALQSTSEPVAGL
GPALAWKPSGSLIASTQEKPSQQDIVFFEKNGLLHGHFTLPFLKDEVKVNGLFWNADSTV
LAVWLEDLQREENCTLKTYVQLWTVGNYHWYLKQSLPFSTCGKSKLVSLMWDLVTPYRLH
VLCQGWHYLCYDWHWTTDRSSGDNSSDMANVAVIDGSRVLVTVFRQSVVPPPMCTYRLLL
PHPVNQVMFSAHPQKSNDLAVLDASNQISVYKCGDSPSVDPTVKLGAVGGNGFKVSLGTP
HLEKRYKIQFENGEDQEVNPLKLSLLTWIQEEVFLAVSHSHSSPQSVIHHLTVMPSVTDD
EPGQLSISSSVAVDGVIISLCCSSKTKSVALQLAGGQMLKYLWESPSLAVEPWKNPSGFP
VRFPYPCTQTELAMIGGEECVLGLTDRCRFFISDTEVASNITSFAVYGEFLLLTTHSHTC
LCFCLRDASFNTLHAGLSNNHVSKGESLRKVERGSRIVTVVPQDTKLILQMPRGNLEVVH
HRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIHDHNPKVFLENVETFIRQIDSVNHI
NLFFTELKEEDVTKTMYPPPVTSTAQLSKDPDGKKVDLICDALRAAMESINPHKYCLSIL
TSHVKKTTPELEIVLQKVHELQGSASPVPDAVSAEEALKYLLLLVDVNELYDHSLGTYDF
DLVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEYFPE
CLNLIKDKNLYKEALKLFPSDSQQYKEISIAYGEHLTQEHLYEPAGLVFARCGAHEKALS
AFLASGSWQQALCMAAQLNWTKDQLAGLSRTLAGKLVEQRKHGDAATVLEQYAQDYEEAV
LLLLEGAAWEEALRLVYKYNRPDIIETNVKPSILEAQKNYVALLESQTATFCRHKQRLLV
IRELKEQAQQVNLDDEVPQGPESDLFSETSSVLSGSDMSGRYSHSNSRISARSSKNRRKA
ERKKHSLKEGSPLEDLALLEALNEIVQSTEKLKDEVYQILKVLFLFEFDEQGRELQKAFE
DTLQLMERSLPEIWTLTHQQNSATTVLGPNATANSIMAAYQQRKTAVPVLDAELLIPPKI
NKRTPWKLSLLE
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatctaaaattacttcggaccctggagttcagggatattcaggctccagggaaa
cctcagtgcttttctctccgaactgaacagaggacagtgctcattggctcagaccatgga
ctgatagaaatagaccctgtcacaagagaagtgaaaaatgaaatttctttagtggcggaa
ggctttcttccagaggacggaagtggctgcattgttggcattcaggacttgctggatcag
gagtctgtgtgtgtggccacagcctccggagatgtcatactctgcaatctcagcacatgc
cagctggaatgtgtggggagtgtggccagtggcatctccatcatgagttggagtcctgac
caagaactggtgcttcttgctacaggtcaacagactctaattatgatgacaaaagacttt
gagcccatcatggaacagaagatccaccaggatgattttggtgaaagcaagtttatcact
gtgggatggggcaggaaggagacgcagttccatggatcagaaggtcggcaagcggccttt
caggtgcaaatgtacgagttggctttgccctgggatgaccatagaccacaagtgacctgg
cgtggtgacggccagttttttgctgtgagtgttgtttgcccagagacaggagcccggaaa
gtgagggtatggaaccgagagtttgctttacagtccaccagtgagcctgtggcaggactg
ggaccagctctggcttggaagccctcaggtagtttgattgcatccacacaagagaaaccc
agtcagcaggatatcgtgttttttgagaaaaacggccttcttcatggacattttacactt
cctttcctcaaagatgaggttaaggtaaacggcctgttctggaatgcagattccactgtg
cttgcagtttggctggaggaccttcagagggaagaaaattgcactctaaaaacctatgtg
cagctctggactgttgggaactaccactggtatctcaagcaaagtctgcccttcagcacc
tgtgggaagagcaagctggtgtctctgatgtgggacctggtgaccccgtaccggctgcat
gttctctgtcagggctggcattacctctgctatgactggcactggacgactgaccggagc
tcaggagataattcgagcgacatggcaaacgtggctgtcattgatggaagcagggtactg
gtgacggtcttccggcagagtgtagttccacctcccatgtgcacctaccggctgctgctc
ccacaccctgtgaatcaagtcatgttctctgcacacccccagaagagtaatgacctcgcg
gtcctagatgccagtaaccagatttctgtgtataaatgtggtgatagtccaagtgtggac
cctacggtgaagctgggagctgtgggtggaaatggatttaaagtttctcttggaacacct
catctggaaaagagatacaaaattcagtttgagaatggtgaagatcaagaagtaaaccca
ttgaagctcagccttctcacctggattcaggaagaggttttcctggctgtaagccacagt
cactccagcccacagtctgtcattcaccatctgactgtgatgccttctgtgacggatgat
gagcccggacagctcagtattagttcatctgtggcagtggatggagtcataatcagtctg
tgttgcagttccaagaccaagtcagtagcactgcagctggctggtggccaaatgcttaag
tacctttgggagtcaccctctctggctgttgaaccatggaagaaccctagtggatttcct
gttcggtttccttatccttgcacacagactgaattggccatgattggaggagaggaatgt
gtccttggtctgactgacagatgccgctttttcatcagtgacactgaggttgcttcaaat
atcacatcgtttgctgtatatggtgaattcttgttgttgacaacccattcccatacctgc
ctgtgtttttgcttgagagatgcttcatttaacacattacatgcaggtctgagcaacaac
cacgtgtctaaaggggaatctctgcggaaggtggagaggggttcacgtattgtcaccgtt
gtgccccaggacaccaagcttatattacagatgccaaggggaaacttagaagttgttcat
catcgagctctggttttagctcagattcggaagtggctggacaaacttatgtttaaagaa
gcatttgaatgcatgagaaaattgagaattaatctcaatctgatccatgaccataacccg
aaggtatttcttgaaaatgtggaaaccttcataagacagatagattctgtaaatcatatc
aatttgtttttcacagaattgaaggaagaagatgttacaaagaccatgtatcctccaccg
gttaccagcactgcccagctgtccaaggatcctgatgggaaaaaagtagaccttatctgt
gatgctctgagagcagccatggagagcataaaccctcacaagtactgcttgtcaatactc
acctctcacgtgaagaaaacaaccccagaactggaaattgtgctgcagaaggtacacgag
cttcaaggcagtgcttcgcctgttcccgatgctgtgagtgctgaagaagccctgaagtat
ttgctgcttctggtagacgttaatgaattatatgatcattctcttgggacgtatgacttt
gatttggtcctcatggtagctgagaagtcacagaaggatcccaaagaatatctgccattt
cttaatacacttaagaaaatggaaaccaattatcagcggttcaccatagataaatacttg
aagcgatatgaaaaagccattgggcacctcagcaaatgtggacccgaatacttcccagaa
tgcttaaacttaataaaagataaaaacttgtataaggaagctctgaagttatttccatca
gactcccagcaatacaaggagatcagcattgcttatggggagcacctgacacaggagcac
ctctacgagccagcagggctcgtgtttgcccgctgtggtgcccatgagaaagctctcagt
gcctttctggccagtggcagctggcagcaagctctctgcatggcagcccaacttaactgg
accaaagaccagctggctggcctcagcagaactctggcaggaaagctggttgagcagagg
aagcatggtgatgcagccacagtcttggaacagtacgcccaggattatgaagaagctgtg
ctcttgttattagaaggagctgcctgggaagaagctctgagactggtatacaaatacaac
agaccagatattatagaaaccaatgtaaagccttccattctagaagcccagaagaattat
gtggcacttctggagtctcagacagccacattctgtcgccataaacaacgtttattggtg
attcgagagctcaaggagcaagcacagcaggtgaacctggatgatgaggtgccccagggt
ccagagtcagacctcttctctgaaactagcagtgtcctgagtggcagtgacatgagcggc
agatattcccatagcaactcgaggatatcagcgcgatcgtctaagaatcgccgcaaagcg
gagaggaagaagcatagcctcaaagaagggagtccactagaggatctggcccttttggag
gcactgaatgaaatcgtacagagcactgaaaaattgaaagatgaagtataccagatttta
aaggtgctctttctgtttgagtttgatgagcaaggaagggaactacagaaggcctttgaa
gatactctccagctaatggaaaggtcacttccagaaatttggactctcacccaccagcag
aattcagctacgacggttctaggtcccaatgctactgccaatagtatcatggccgcttac
caacaacggaagactgcagttcctgttcttgatgctgagcttttgatacccccaaagatc
aacaaaagaaccccgtggaaactgagccttctagagtga
DBGET
integrated database retrieval system
