Lynx rufus (bobcat): 124502898
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Entry
124502898 CDS
T08475
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04517
IgSF CAM signaling
lruf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124502898
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124502898
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lruf04812
]
124502898
Cytoskeleton proteins [BR:
lruf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124502898
Intermediate filaments
Intermediate filament-binding proteins
124502898
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
124502898
NCBI-ProteinID:
XP_046923463
LinkDB
All DBs
Position
Unknown
AA seq
2351 aa
AA seq
DB search
MELQRTSSISGPLSPAYTGQVPYNYNQLEGRFKQLQDEREAVQKKTFTKWVNSHLARVSC
RITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENM
GSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNV
NIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDP
EDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEKMIEKYESLASD
LLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKM
RANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLEQLARRFDRKAAM
RETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAVVAVARELEAENY
HDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYIMDWMDEMKVLLLS
QDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEGYKPCDPQVIRDRV
AHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKILSSDDYGKDLTSV
MRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERILYIREQWANLEQLS
AIRKKRLEEALLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQSLVKKHKDVAEEI
ANYRPTIDTLHEQASALPQEHAESPDVRGRLSGIEERYKEVAELTRLRKQALQDTLALYK
MFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIAR
QLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYHLECNETKSWIRE
KTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEKLESEHPDQAQAI
LSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNT
LTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNE
LHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQED
FMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKNREAASELLMRLKD
NRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELASNKEWLDKI
EKEGMQLISEKPETEAVVKEKLTGLHNMWEVLESTTQTKAQRLFDANKAELFTQSCADLD
KWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQSQAQALSQEGKST
DEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILWVGERMPLATSTDH
GHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIVTDSSSLNAEAIRRRLADLKEL
WGLLIEETEKRHRRLEEAHRAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSAVSMLKK
HQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLYAGLKDLAEERRGK
LDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQE
RVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHD
AKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAA
YAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQ
IEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLL
QLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSSREIGQSVDEVE
KLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRPPSPEPSTKASEEM
ESQQQWDTSKGEQVSQNGLPTEQGSPRMAEAVDTSEMVNGAAEQRTSSKESSPIPSPTSD
RKAKTALPAQSAATLPARTQETPSAQMEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQE
MGFYKDAKTAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLNDGNEYLFQAKDDE
EMNTWIQAISSAISSDKHEVSASTQSTPASSRAQTLPTSVVTITSESSPGKREKDKEKDK
EKRFSIFGKKK
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atggaattgcagaggacgtctagcatctctgggccgctgtccccagcttacacggggcag
gtgccttacaactacaaccagctggaaggcagattcaagcagctacaagatgagcgtgaa
gctgtgcagaagaagaccttcaccaagtgggtcaattcccacctcgcccgggtgtcctgc
cggatcacagacctgtacactgaccttcgagatggacggatgctcatcaagctactggaa
gttctctctggagagaggctgcctaaacccaccaagggacgaatgcgtatccactgtctg
gagaatgtggacaaggcccttcagttcctgaaggagcagagagtccatcttgagaacatg
gggtcccatgacatcgtggatgggaaccaccggctgaccctcggcctcatctggaccatc
atcctgcgcttccagatccaggatatcagtgtagaaactgaagacaacaaagagaagaaa
tctgccaaggatgcattgctgttgtggtgccagatgaagacagctgggtacccgaacgtc
aacattcacaatttcaccaccagctggagggacggcatggccttcaatgccctgatacac
aaacaccggcctgacctgatagatttcgacaaactaaagaaatccaatgcacactacaat
ctgcagaatgcgtttaatctggcagagcagcaccttggcctcactaaactgttggatccg
gaagatatcagtgtggaccaccctgatgagaagtccattatcacttatgtggtgacttat
taccactacttctctaagatgaaggctttggctgttgaaggaaaacgaattggaaaggtg
cttgacaatgctattgaaacagaaaaaatgattgaaaagtatgagtcacttgcctctgat
cttctggagtggattgaacaaaccatcattatattgaacaatcgcaaatttgccaattct
ctggttggggttcaacaacagcttcaggcttttaacacttaccgcactgtggagaaacca
cccaagtttactgagaaggggaacttggaagtgctgctttttactattcagagcaagatg
agggccaacaatcagaaggtctacatgccccgggagggcaagctcatctctgacattaac
aaggcctgggaaagactggaaaaagcggaacacgagcgagaactggctctgcggaacgag
ctcatcagacaggagaaactggaacagctcgcccgcagattcgatcgcaaggcagctatg
agggagacctggctgagcgaaaaccagcgtctggtgtctcaggacaactttggttttgac
cttcctgctgttgaggccgccacaaaaaagcacgaggccattgagacagacatcgccgca
tacgaggaacgtgtgcaggcggtggtagcagtggccagggagcttgaggcggagaactac
cacgacatcaagcgcatcacagcaaggaaagacaatgtcatccggctctgggagtacctg
ctggaactgctcagggcccggaggcagcgtcttgagatgaacctggggctgcaaaagata
ttccaggaaatgctctacattatggactggatggacgaaatgaaggtgctattactgtct
caagactatggcaagcacttgcttggtgtggaagacctgttacagaagcacgccctggtt
gaagcggacattggcatccaggcagagcgagtgagaggcgtcaatgcctctgcccagaag
ttcgcaacagacggggaaggttacaagccctgtgaccctcaggtgatccgagaccgcgtg
gcccacatggagttctgttaccaagaactctgccagctggcagccgaacgccgggctcga
ctggaagagtcccgtcgcctctggaagttcttctgggagatggcagaagaggagggctgg
atacgagagaaggagaagatcctgtcctccgacgattatgggaaggacctgaccagcgtc
atgcgcttgctcagcaagcaccgggcattcgaggatgagatgagcggccgcagtggccat
ttcgagcaggccatcaaagaaggtgaagacatgatcgcggaggagcactttgggtcagag
aagatccgagagcggatcctttacatccgggagcagtgggccaacctggagcagctctcg
gccatccggaagaagcgcctggaggaggccttgctgctacaccagttccaggcagacgcc
gatgacattgacgcgtggatgctggacatcctcaagattgtctccagcaatgacgtgggc
catgacgagtactccacgcagtctctggtcaagaaacacaaggacgtggcagaggagatc
gccaactataggcccaccatcgacacgctgcacgagcaggccagcgccctcccccaggag
catgccgagtctccagatgtgaggggccggctgtcaggcatcgaggaacggtacaaggag
gtggcagagctgacgcggctgaggaagcaggcactgcaggacaccctggccttgtacaag
atgttcagtgaggctgatgcctgtgagctctggatcgacgagaaggagcagtggctcaac
aacatgcagatcccagaaaaactggaggacctggaagtcatccagcacagatttgagagc
cttgagcctgaaatgaacaaccaggcttcccgggtcgcagtggtgaaccagattgcacga
cagctcatgcacagtggccacccaagtgagaaggagatcaaagcccagcaggacaaactc
aacacaaggtggagtcagttccgagagctggtcgacaggaagaaggacgctcttctctct
gccctgagcatacagaactaccaccttgagtgcaatgaaaccaaatcctggattcgagaa
aagacaaaggtcatcgagtccacccaggacctgggcaacgacctggccggcgtcatggcc
ctgcagcgcaagctgaccggcatggagcgggacctggtggccatcgaggcaaagctgagc
gacctgcagaaagaggcggagaagctcgagtccgagcaccccgaccaggctcaggccatc
ctgtctcggctggccgagatcagcgacgtgtgggaggagatgaagacaaccctgaaaaac
cgcgaggcctccctgggagaggccagcaagctgcagcagttcctgcgggatctggatgac
ttccagtcctggctctcccggacccagacggccatcgcctctgaggacatgcccaacacc
ctgactgaggcagagaagctcctcacgcagcatgagaacatcaaaaacgagatcgacaac
tacgaggaggactaccagaagatgagggacatgggcgagatggtcacccagggacagacc
gacgcccagtacatgtttctgcggcagcggctgcaggccctggacaccgggtggaacgag
ctgcacaaaatgtgggagaacaggcagaatctcctgtcccagtcacatgcctaccagcag
ttccttagggacacgaagcaggccgaggccttccttaacaaccaggagtatgttttggct
catactgaaatgcctaccaccttggaaggagctgaagcagctattaaaaaacaagaggac
ttcatgaccaccatggatgccaatgaggagaagatcaatgctgtcgtggagacaggccgg
aggctggtgagcgatggaaacatcaactcagatcgcatccaggagaaggtggattccatt
gatgacagacataggaagaatcgcgaggcagccagcgagcttctgatgcgtttgaaggac
aaccgggatcttcagaaattcctgcaagattgtcaggagttatctctttggatcaatgaa
aagatgcttactgcccaggacatgtcttacgatgaagccagaaatctgcatagtaaatgg
ttaaaacatcaagcatttatggcagaacttgcatccaacaaagaatggcttgacaaaatt
gagaaggaaggaatgcagctcatttcagaaaagcctgagacggaagctgtggtaaaggaa
aaactcactggtttacataacatgtgggaagtcctcgagtccaccacccagaccaaggcc
cagcggctctttgatgcaaacaaggctgaacttttcacccagagctgtgcagatctggac
aaatggctgcacggcctggagagtcagattcagtctgatgactatggcaaagaccttacc
agcgtcaacatcctgcttaaaaagcaacagatgctggagaaccagatggaggtgcggaag
aaggagatcgaggagctccagagccaggcccaggccctgagtcaggaggggaagagcact
gacgaggtggacagcaagcgcctcactgtgcagaccaagttcatggaactgctggagccc
ttgaatgaaagaaagcataatctgctggcctctaaagagatccatcagttcaacagggat
gtggaggatgagattttgtgggttggagagaggatgcctttggcaacttccacagatcat
ggccacaacctccagactgtgcagctgttaataaagaaaaatcagaccctccagaaagaa
atccaggggcaccagcctcgcattgatgacatctttgagaggagccaaaacattgtcacc
gacagcagcagcctcaacgccgaagccattcgacggaggctcgctgacctcaaggagcta
tggggtctcctcattgaggagaccgagaagcgccacaggcggcttgaggaggcgcacagg
gcccagcagtactacttcgatgctgctgaggctgaggcgtggatgagcgagcaagagctg
tacatgatgtctgaggagaaggccaaggatgagcagagtgccgtctccatgttgaagaag
caccagattctggaacaagccgtggaggactatgcagagaccgtgcatcagctctctaag
accagccgggccctggtggctgacagccatccggaaagtgagcgcatcagcatgcggcag
tccaaagtggacaagctgtacgcgggtctgaaagacctggccgaagagcggaggggcaag
ctggacgagaggcacaggctcttccagctcaaccgggaggtggacgacctggagcagtgg
atcgctgagagggaggtggtcgcagggtcgcatgagttggggcaggactacgagcatgtc
acgatgttacaagaacgattccgggaatttgccagagacacagggaacattggacaggag
cgtgtggacacagtcaatcacatggcagatgagctcatcaactctggtcattcggatgcc
gccaccatcgccgagtggaaggatgggctcaacgaagcctgggctgacctcctggagctt
atcgacacgagaacacagattctcgccgcctcttatgaactgcacaagttttaccatgat
gccaaggagatctttgggcgcatacaggacaaacacaagaaactccccgaggagcttggg
agagatcagaacacagtggagaccttacagagaatgcacaccacgtttgagcatgacatc
caggctctgggcactcaggtcaggcagctgcaggaggatgcggcccgtctacaggcagcc
tacgcgggtgacaaggctgacgacatccagaagcgggagaatgaggtcctggaagcctgg
aaggccctgctggatgcctgtgagggccgcagggtgcggctggtggacacgggggacaag
ttccgcttcttcagcatggtacgagacctcatgctgtggatggaagacgtcatccggcag
attgaagcccaggagaagccaagggatgtatcatctgttgaactattaatgaataatcat
caaggtatcaaagctgaaatcgatgctcgtaatgacagctttacaacttgcattgaactt
gggaagtccctactggcgaggaagcactatgcatctgaggagatcaaggaaaagctattg
cagttgacggaaaagagaaaagaaatgattgacaagtgggaagaccgatgggaatggtta
agactgattttggaggtccaccagttctcacgggacgccagtgtggccgaggcctggctg
ctcggacaagagccatacctatccagccgagaaataggccagagtgtggatgaggtggag
aagctcatcaagcgccacgaggcttttgaaaagtctgcagcaacctgggacgagaggttc
tctgccctggaaaggctgacaacgttggagttactggaagtgcgcagacagcaagaggaa
gaggagaggaagaggcggccgccctctcccgagccgagcacgaaggcttccgaggagatg
gagtcccagcagcagtgggatacctcaaaaggagaacaagtttcccagaacggtttgccg
actgaacagggatctccacggatggcagaagcggtggacacaagcgaaatggtcaacggc
gccgcagagcaaagaacaagctcaaaggagtctagccccatcccctcccccacgtccgac
cgcaaagccaagactgccctcccggcccagagtgccgccaccttgccggccagaacccag
gagacgccttcggcccagatggaaggcttcctgaatcggaagcacgagtgggaggctcac
aataagaaagcctcaagcaggtcctggcacaatgtttattgtgtcataaataaccaagaa
atgggtttctacaaagatgcaaagaccgctgcctctggaattccctaccacagcgaggtc
cctgtgagtttgaaagaagccatctgtgaagtggcccttgattacaagaagaagaaacac
gtgttcaagctaagactaaatgatggcaatgagtacctcttccaagccaaagatgatgag
gaaatgaacacatggatccaggccatctcctccgccatctcctctgataaacacgaggtg
tccgccagcacccagagcacgccagcatccagccgggcacagaccttgcccaccagcgtc
gtcaccatcaccagcgagtctagccctggcaagcgggagaaggacaaagagaaagacaag
gagaagaggttcagcatttttggcaaaaagaagtga
DBGET
integrated database retrieval system
