Lynx rufus (bobcat): 124502900
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Entry
124502900 CDS
T08475
Name
(RefSeq) high affinity choline transporter 1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04082
Neuroactive ligand signaling
lruf04725
Cholinergic synapse
lruf05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
124502900
09150 Organismal Systems
09156 Nervous system
04725 Cholinergic synapse
124502900
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
124502900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lruf02000
]
124502900
Transporters [BR:
lruf02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
124502900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
124502900
NCBI-ProteinID:
XP_046923470
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MAFHVEGLIAIIVFYLLILLVGIWAAWRTKNSGSSEERSEAIIVGGRDIGLLVGGFTMTA
TWVGGGYINGTAEAVYVPDYGLAWAQAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFQQ
IYGKRMGGLLFIPALMGEMFWAAAIFSALGATISVIIDVDVQASVIVSALIATLYTLVGG
LYSVAYTDVVQLFCIFIGLWISVPFALSHSAVADIGYTALHTKYQKPWLGTIESFEIYTW
LDSFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCLVMALPAILIGAIGASTDW
NQTTYKPLDPKDNDEADMILPIVLKYLCPVYISFFGLGAVSAAVMSSADSSILSASSMFA
RNIYQLSFRQNASDKEIIWVMRITVFVFGASATAMALLTKTVYGLWYLSSDLVYIIIFPQ
LLCVLFVKGTNTYGAVAGYVSGLFLRITGGEPYLYLQPLIFYPGYYPDKNGIYNQRFPFK
TLSMVTSFLSNICISYLAKYLFESGNLPPKLDVFDAVVARHSEENMDKTILVKNENIKLD
ELAPVKPRQSITLSSTFTNKEAFLNIDSSPEGSGTEDNS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggctttccatgtggaaggactgattgctatcatcgtgttctaccttctaatattgctg
gttggaatatgggctgcctggagaaccaaaaacagtggcagctcagaagagcgcagcgag
gccatcatagttggtggccgagacattggtctgctggtgggtggatttaccatgacagcc
acctgggtcggaggaggttacatcaacgggacagctgaagcagtgtatgtaccagactat
ggtctagcttgggctcaggcaccaattggatattctcttagtctgattttaggtggtttg
ttctttgcaaagcctatgcgttccaaaggatatgtgactatgttagacccgtttcagcag
atctatggaaagcgcatgggtgggctcctatttattcctgcgctaatgggagaaatgttt
tgggctgcagccattttctctgccttaggagccaccatcagcgtgatcattgacgttgat
gtgcaagcttctgtcattgtttctgcgctcattgccactctctacacgctggtgggtggt
ctgtactccgtggcctacacggatgtagttcagcttttctgcatcttcataggcctgtgg
atcagcgtccccttcgccctgtcacattctgcagttgctgacattgggtacactgctctg
cacaccaaataccaaaagccttggctggggaccattgaatcatttgaaatctacacttgg
cttgatagttttctgttgttgatgctgggtggaatcccatggcaagcctacttccagagg
gtcctctcttcatcctcagccacctatgctcaagtgttgtcattcctggcagcttttggg
tgcctggtgatggctttaccagccatactcattggggccattggagcatcaacagactgg
aaccagactacatataagcctctagatcccaaggacaatgatgaagcagacatgatttta
ccaattgttctgaagtacctctgccctgtgtacatctctttctttggtctcggtgcagtt
tctgctgctgttatgtcatcagcagattcttctatcttgtcagcaagttccatgtttgcc
cggaacatctaccagctttcattcagacaaaatgcatcagacaaagaaatcatctgggtt
atgcgaatcacagtgtttgtgtttggagcttctgccacagccatggccttgctgacgaag
actgtgtatgggctctggtacctcagctcagacctcgtttacatcatcatcttcccgcag
ctgctctgtgtgctcttcgtcaagggaaccaacacgtatggggctgtggcaggttatgtg
tctggccttttcttgagaataactggcggggagccatatctgtacctgcagcccttgatc
ttttatcctggttattaccctgataagaatggcatatataatcagagattcccatttaaa
accctttccatggttacctcattcttatccaacatttgcatctcctatctagccaaatat
ctatttgagagtggaaacttgccacccaaattagatgtgtttgatgctgttgttgcaagg
cacagtgaagaaaacatggataagacaattctggtcaaaaatgaaaatattaaattagat
gaacttgcacctgtgaagccccgacagagcataactctcagctcaacttttaccaataag
gaggccttcctcaacattgattcaagtccagaagggtctgggactgaagataactcctaa
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