Lynx rufus (bobcat): 124503256
Help
Entry
124503256 CDS
T08475
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124503256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lruf04131
]
124503256
Membrane trafficking [BR:
lruf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
124503256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
124503256
NCBI-ProteinID:
XP_046924112
LinkDB
All DBs
Position
Unknown
AA seq
1542 aa
AA seq
DB search
MGTALLQRGGCFLLCLSLLLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFQLKT
RSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGAWHNVRIR
RQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPF
KGWIRDVRVNSSQALPVDSGEVKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQ
AVCDCSRTGFRGKDCSQVINVCPMLLHDNDQGKICCANLLKPLTYKDNNVEGLAHLMMGD
QGKSKGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVN
LALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHC
SVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKN
NDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKTGSIS
FDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKA
LQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLPENKAGL
VFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSRETAKPCLSNPC
KNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMHTEAEDVSLR
FRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETLFAGYNLN
DNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETGIITERRYLSSVPSNF
IGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKSSYVALATLQAYT
SMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLND
NQWHNVMISRDTSNLHTVKIDTKITTQITAGARNLDLKSDLYIGGVAKETYKSLPKLVHA
KEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGF
SCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVL
VRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNAT
LQVDSWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQATIIIG
GKEQGQPFQGQLSGLYYNGLKVLNMAAENDANIAIVGNVRLVGEVPSSMTTESTATAMQS
EMSTSIMETTTTLATSTARRGKPPTKEPISQTTDDILVASAECPSDDEDIDPCEPSSGGL
ANPTRAGGREPYPGSAEVIRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHV
DESRNYISNSAQSNGAVVKEKQPSSAKSANKNKKNKDKEYYV
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggggacggcgcttctccagcgcgggggctgctttctcctgtgcctctcgctgctgctc
ctgggctgctgggcagagctgggcagcgggctcgagttcccgggcgctgagggccagtgg
acacgcttccccaagtggaacgcctgctgcgagagcgagatgagcttccagctcaagact
cgcagcgcccgcggtctcgtgctctacttcgacgacgagggcttctgcgacttcctggag
ctcatcctgacgcgcggcggccgccttcagctcagcttctccattttctgcgcggagccc
gccacgctcctggccgacacgccggtcaacgacggcgcctggcacaacgtgcgtatccgc
cgccagttccgcaacaccacgctcttcatcgaccaggtggaggccaaatgggtggaggtc
aagtcgaagcgcagggacatgaccgtgttcagcggcctctttgtcggggggctgcccccg
gaactgcgcgctgcggcgctcaagctgacgctggcctcggtgcgggagcgagagcccttt
aaagggtggatccgtgacgtgagggtcaactcctcccaggccctgccagtggacagcggc
gaggtgaagctggacgacgagccgcccaacagtggcggcgggagcccgtgcgaggctggc
gaggagggcgagggcggggtgtgcctcaacggaggcgtgtgctcggtggttgacgaccag
gcggtgtgcgactgttcgagaaccggcttccgcggcaaggactgcagccaagtcattaat
gtgtgtccaatgttgctacatgacaatgaccaaggaaaaatatgctgtgcaaatcttctt
aagcctttgacttacaaagacaacaatgtggaaggtctggcgcacctgatgatgggcgac
caaggtaaaagtaaaggaaaagaagaatatattgccactttcaagggatctgaatacttc
tgctacgacttgtctcaaaaccccatccaaagcagcagcgatgaaataactctgtccttt
aaaactcttcagaggaatggactgatgcttcacaccgggaaatcggctgattatgtcaat
cttgccctgaaaaatggagctgtttctctggtcattaatttgggatcaggggcctttgaa
gcactagtggagcccgtgaatggaaagtttaatgataatgcctggcatgatgtgaaagtc
accaggaatctgcgtcagcactcaggcattggacacgctatggtaaacaaactacattgt
tcggtgacaatatcagtggatgggattcttaccacaacgggctacacgcaagaagattat
accatgctggggtctgatgactttttctatgttggaggcagtcccagcacagcagacctt
ccagggtcaccagtcagtaacaactttatgggctgtctcaaagaggttgtatataaaaat
aatgatgtaagactggaattatctcgtcttgccaaacaaggagaccctaagatgaagatc
catggagtggtagcatttaaatgtgagaatgttgcaactttggacccaatcacctttgaa
accccagagtctttcatctctttgcctaaatggaacgcaaagaaaacaggctccatatca
tttgatttccgtacaacagagccaaatggcctcatcttatttagccatggcaagccaaga
caccaaaaagatgccaagcaccctcagatgataaaggttgacttctttgctattgagatg
ctggatggccatctctacctcctcctggacatggggtcaggtacaataaaaatcaaagcc
ctacagaagaaggtgaatgatggagaatggtatcatgtggacttccagagagatggacgg
tcaggtaccatttctgtcaacacgctgcgcacgccctatactgctcctggcgagagcgag
attctggacctggatgatgagttgtacctggggggcttgccagaaaataaggctggcctc
gtcttccccaccgaggtgtggactgctctgctcaattacggctacgtgggctgcattaga
gatttgttcattgatggccagagcaaagatatccggcaaatggctgaaattcaaagtact
gctggagtgaagccctcctgctcaagggaaacagcaaaaccgtgccttagcaacccctgc
aaaaacaatggcatgtgcagggatgggtggaacagatatgtctgtgattgttccggaaca
ggctatcttggcaggtcctgcgagagagaggcaacggttctgagctacgatgggagtatg
tttatgaaaatccagctcccggtggtgatgcacacagaggctgaagatgtgtccttacgg
ttccgatcacagcgtgcatacggcattctcatggcaaccacttctagagattcagcagac
accctccgcctggagctggatgcagggcgtgtgaaactgacggtcaatctagattgtatc
aggattaactgtaattccagcaaaggtcccgagaccctttttgccggctataacctcaat
gataacgaatggcacacagtgcgtgtggtccgtcgaggaaaaagtttaaagttaaccgtg
gatgaccaacaggccatgacaggtcaaatggcaggcgatcacacgaggctggagtttcat
aacatagagactggcatcatcacggaacgtcggtatctgtcttctgtcccctccaacttc
attggacacctgcaaagcctgacatttaatggaatggcatacattgacttgtgtaaaaat
ggtgacatagattactgtgagctcaatgccagatttggcttcaggaacatcatagcagac
cctgtcaccttcaagaccaaatcaagttatgttgccttagctacattgcaagcctacact
tctatgcatctttttttccagttcaagacaacatccctagatggactaatactatataat
agtggggatggaaatgactttattgtggtcgaattagttaaagggtacttacattatgtg
tttgatttgggaaatggtgctaaccttatcaaagggagctcaaataaacctctcaatgac
aatcagtggcacaatgtgatgatctcaagggacaccagcaatctccacactgtcaaaatt
gacacgaaaatcacaacacaaatcactgcgggagccaggaacttggaccttaaaagtgac
ttatatataggaggagtggctaaagaaacctacaaatctttgccaaaactcgtccatgcc
aaggagggttttcaaggctgcctggcctcagttgatttaaatggacgacttccagacctc
atctcagatgctcttttctgcaatggacagattgagagaggatgtgaaggacccagcaca
acctgccaagaggactcctgttccaatcaaggtgtgtgcttgcagcaatgggatggcttc
agctgtgactgtagtatgacttccttcagtggtccactctgcaatgaccctgggacaaca
tatatctttagcaaaggtggtggacaaatcacgtataagtggcctcctaatgaccggcca
agtacacgagcagacagactggccatagggtttagcactgttcaaaaagaagctgtattg
gtgcgagtggacagttcttctggcctgggtgactacctagagcttcatatacaccaagga
aaaattggagttaaatttaatgttgggacagatgacatcgccattgaggagtccaatgca
atcattaacgatgggaaataccatgtagtccgttttacaaggagtggtggcaatgccaca
ttacaggtggacagctggccagtgatcgagcgctaccctgcaggaaacaatgataacgag
cgcctggcgattgctagacagcgaattccatatcgacttggtcgagtagttgatgaatgg
ctactcgacaaagggcgtcagctcacaatcttcaatagccaagcaaccataataattggc
gggaaagagcagggccagcccttccagggccagctctctgggctttactacaatggcttg
aaagttctgaatatggcagccgaaaatgatgccaacatcgccatagtgggaaatgtgaga
cttgttggtgaagtgccttcctcaatgacaactgagtcgacagccactgccatgcagtca
gagatgtccacatcaattatggagaccaccacaaccctagctactagcacagccagaaga
ggaaagccccctacaaaagaacccattagccagaccacagatgacatccttgtggcctca
gcagaatgtcccagcgacgatgaggacattgacccctgtgagccgagctcaggtgggtta
gctaacccaacccgagcaggcgggcgagagccgtacccaggctcagcggaagtgattcgg
gagtccagcagcaccacaggcatggtggtggggatcgtagctgccgccgccctgtgcatt
ctcattctcctctatgccatgtacaagtacagaaaccgggatgaaggctcgtatcatgtg
gatgagagtcgaaactacatcagtaactcagcacagtccaacggggctgttgtaaaggag
aaacaacccagcagtgcgaaaagcgccaacaaaaataagaaaaacaaggataaagagtat
tacgtctga
DBGET
integrated database retrieval system