Lynx rufus (bobcat): 124503258
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Entry
124503258 CDS
T08475
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124503258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lruf03041
]
124503258
Spliceosome [BR:
lruf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124503258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
124503258
NCBI-ProteinID:
XP_046924134
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MASSRASSTATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA
DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ
EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH
IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG
WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcacgagcctcctccacggcaaccaaaactaaggcacctgatgacttagtt
gctcctgttgtgaagaaaccacatatctattatggaagtttggaagagaaggagagggag
cgtctggccaaaggagagtctgggattttgggaaaagaaggacttaaagctggaattgaa
gcaggaaatattaacataacctctggagaggtgtttgaaattgaagagcacatcagtgaa
cgacaggctgaagtattagccgagtttgagagaagaaagcgagcccggcaaatcaatgtt
tccactgatgactcagaggtcaaggcttgccttagagccttgggggagcccatcacactc
tttggagagggtccggctgaaagaagagaaaggttaagaaatatcctctcagtggttggt
actgatgccctaaaaaagaccaaaaaagatgatgagaaatctaagaagtccaaagaagag
tatcaacaaacctggtaccatgaaggaccaaacagcctgaaggttgctagactgtggatt
gctaattattcgctgccaagggcaatgaaacgcttagaagaggcccgtctccataaagag
attccagagacaacgaggacctcccagatgcaagagctgcacaaatctctccggtctttg
aataatttctgcagtcagattggggatgatcggcctatctcctactgccactttagtcct
aattccaaaatgctggccacagcttgttggagtgggctttgcaagctctggtctgttccc
gattgcaacctccttcacactctccgaggccataacacaaacgtaggagcaattgtattc
catccaaaatccactgtctccttggaccagaaagatgtcaatctggcgtcttgtgctgct
gatggttctgtgaagctttggagccttgacagtgatgaaccagtggcagatattgaaggc
catacagtacgtgtggcccgtgtaatgtggcatccatcaggacgtttcttgggcaccact
tgctatgaccgctcatggcgcttatgggatttagaggctcaagaggagatcctgcatcag
gaaggccacagcatgggcgtgtatgacatcgccttccatcaggatggctctttggctggc
actgggggactggatgcgtttggtcgtgtttgggacctgcgtacaggacggtgtatcatg
ttcctagaaggccacctgaaggaaatctatggaataaatttctcccccaatggctaccac
attgcaaccggcagcggtgacaacacctgcaaagtgtgggacctccggcagcggcgctgt
gtctataccatccccgcccatcagaacttagtgaccggtgtcaagtttgagcctatccat
gggaatttcttgctcactggtgcttacgacaacacagccaagatctggacacacccaggc
tggtccccactgaagactttggctggccatgaaggcaaagtgatgggcctagacatttct
tcagatgggcagctcatagccacttgctcttacgacaggaccttcaagctctggatggct
gaatag
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integrated database retrieval system
