Lynx rufus (bobcat): 124503285
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Entry
124503285 CDS
T08475
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04140
Autophagy - animal
lruf04148
Efferocytosis
lruf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124503285
04148 Efferocytosis
124503285
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124503285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lruf04131
]
124503285
Membrane trafficking [BR:
lruf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124503285
Hops complex
124503285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
124503285
NCBI-ProteinID:
XP_046924174
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA
SVRPVLEIYSASGLPLASLLWKSGPVVSLGWSAEEELLCVQEDGGVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVSDLKLRRMPEVPGLQGAPTCW
TALCQDRVAHILLAVGPDLYLLDQSACSAVTPFGLAPGVSSFLQMAVSFTYRHLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHEHRPDMQKSLLRAASFGKCFLDRFPPDSFVR
MCQDLRVLNAIRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGRFLDLSLHDTVTTLILGGHNKRAEQLARDFR
IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNEAELSLVLSHCTGATDGATADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacacggcgaactggaacccgctcggggactctgccttttaccggaaatat
gagctgtacagcatggactgggacctgaaggaggaactcagggattgcctggtagctgct
gcgccctacgggggccccattgcactgttgaggaacccgtggcggaaggagaaggctgcc
agcgtacggccagtgcttgagatctattctgcttccggcctgcctctggccagtctgctg
tggaagagtgggcccgtggtgtccctaggctggtcagctgaagaggagctgctctgcgtg
caggaggatggtggagtgctggtgtatgggcttcacggtgacttccggagacacttcagc
atgggcaatgaggtgctccagaaccgggttctggacgcccggatcttccatactgagttt
ggttcaggggtggccatcctcaccggggcccaccgctttactctcagtgccaatgtcagt
gacctcaaactccgccggatgccagaggtgccaggtctgcagggtgcacctacgtgctgg
accgccctctgccaggaccgagttgcacacattcttctggctgtggggcctgatctttac
ctcctggaccagtctgcctgctctgcagtgacaccttttggcctggcgccaggagtgagc
agcttcctgcagatggccgtctccttcacctaccgacacctggcactcttcacggacaca
ggctacatctggatggggacagcatcactcaaggagaagctgtgtgagttcaactgtaac
atccgggcccccccgaagcagatggtctggtgcagccgccctcgcagcaaagagagggcc
gttgtggtggcctgggagaggcggctaatggtggtgggtgatgcgcccgagagcatccag
tttgtgctggacgaagactcctatttggttcctgagctggatggggtccgcatcttctct
cgtagcacccacgagttcctacatgaggttccagtggccagcgaggagatcttcaaaatt
gcctcgatggcccctggagcgctattgttggaggcccagaaagagtatgagaaagagagc
cagaaggcagatgagtacctacgggagatccaggagctggggcagctgacccaggccgtg
cagcagtgcatcgaggccgcgggacatgagcaccggccagacatgcagaagagcctgctc
agggcggcctcctttgggaagtgtttcctcgacagatttccacctgacagctttgtgcgc
atgtgtcaggacctgcgtgtgctcaatgccattcgggattatcacatcgggatccccctc
acttatagccaatataagcagctcaccatccaggtgctgctggacaggcttgtgttgcgg
aggctttaccccctggcgatccagatttgtgagtacctgcgccttcctgaagtgcagggc
gtcagcaggatcctggcccattgggcctgctacaaggtgcaacagaaggacgtgtccgac
gaggatgttgctcgggccattaaccagaagctgggggatacgcctggcgtctcttactct
gacattgctgcgagggcctatggctgtggccgcacagagctggccatcaagctgctggag
tatgagccacgctctggggagcaggtaccccttctcctaaagatgaagaggagcaaactg
gcgctgagcaaggccattgagagtggggacactgatctggtgttcacggtgttgctgcac
ctgaagaatgagctaaatcgaggagattttttcatgactcttcggaaccagcccatggcc
ctgagtttgtaccgacagttctgtaaacatcaggagctagagacgctgaaggacctctac
aatcaggatgacaaccaccaggagctgggcagcttccacatcagagccagttatgctgca
gaggagcgtatcgaggggcgggttgcagctttgcagacagcagctgacgccttctacaaa
gccaagaacgagttcgcagccaaggccacagaggatcaaatgaggctcctacggctgcag
cgacgcctagaagatgagttggggggccggttcctggacttgtctctacacgacacggtc
actaccctcatccttggaggccacaacaagcgcgcagagcagctggcacgtgacttccgc
attcctgacaagaggctctggtggctgaagctgactgccctggccgatctggaagactgg
gaggagctagagaagttttcaaagagcaagaaatcacccattggctacctgccctttgtt
gagatctgcatgaagcaacacaacaaatatgaggccaagaagtatgcctcccgtgtgggt
ccggagcagaaggtcaaggccttgcttctcgttggggatgtggctcaggccgcagatgtg
gccatcgagcacaggaatgaagcagagctgagccttgtattatcccactgcactggagcc
acagatggggccacggctgacaaaattcagcgggctagggcacaagcccagaagaagtga
DBGET
integrated database retrieval system
