Lynx rufus (bobcat): 124503474
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Entry
124503474 CDS
T08475
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lruf03041
]
124503474
03016 Transfer RNA biogenesis [BR:
lruf03016
]
124503474
Enzymes [BR:
lruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124503474
Spliceosome [BR:
lruf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124503474
Transfer RNA biogenesis [BR:
lruf03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
124503474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
124503474
NCBI-ProteinID:
XP_046924509
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKAADGYVVKSQHTGNAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDDVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttttctgagatgggtgttatgcctgagattgctcaagctgtagaggagatg
gattggctgctcccaactgatatccaggctgaatctattccactgatcctaggaggcggt
gatgtccttatggctgcagaaacaggaagtggaaaaactggtgctttcagtattccagtt
atccagatagtttatgaaactctgaaagaccaacaggaaggcaaaaaaggaaaaacaaca
attaaaaccggtgcttcagtgctcaacaaatggcaaatgaacccatatgatagaggatct
gcttttgcaattgggtcagatggtctttgttgtcaaagcagagaagtgaaggagtggcat
ggatgcagagccactaaagggttgacgaaaggaaagcactactatgaagtatcctgtcat
gaccaaggattgtgcagggttggctggtcttccatgcaggcttccttagacctaggtact
gacaagtttggatttggctttggtggaacaggaaagaaatcccataataaacagtttgat
aattatggagaggaattcactatgcatgataccattggatgttacctagatatagataaa
gggcatgtcaagttctccaaaaatggaaaagaccttggtctggcatttgaaataccacca
catatgaagaaccaagccctctttcctgcttgtgttttgaagaatgctgaactaaaattt
aacttcggtgaagaagaatttaagtttccaccaaaagatggttttgttgctctttccaag
gcagcggatggttatgttgtcaaatcacagcacacaggtaatgcgcaggtggcacaaaca
aagtttctccccaatgctccgaaagctctcatcgtcgagccctcccgagagttagctgaa
caaactttgaataacgtcaagcagtttaagaaatacattgataatcctaaattaagggag
cttctgataattggaggtgttgcagcacgagatcagctctctgttttggataatggggta
gatatagtcgttggcaccccaggaagactagacgatttggtgtcaactgggaaactgaac
ttatcccaagttagattcctggtcctggatgaagctgatggacttctttctcaaggttac
tctgattttataaataggattcacagtcagattcctcagattacctctgatgggaaaaga
cttcaggtgattgtttgctctgctactttgcactcttttgacgtaaagaagctgtctgag
aagataatgcattttcccacgtgggttgatttaaaaggagaagattctgtcccggatact
gtgcaccatgtggttgtcccagtgaaccccaaaactgacagactctgggaaaggcttggg
aaaaaccacattagaactgatgatgtacatgcaaaagataacacaaggcctggtgctaat
agtccggagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgggcg
atcaaggaacacaagatggatcaagccattattttctgtagaaccaaaattgactgcgat
aacttggagcaatattttatgcaacaaggaggaggacctgataaaaaaggacaccagttc
tcatgtgtttgtcttcatggtgacagaaagcctcacgagaggaagcaaaacttggaaaga
tttaagaaaggagatgtgaggttcttgatttgcacggatgtagccgccagaggaattgac
atccatggtgttccctacgttataaatgtcactttgcctgatgagaagcaaaactacgtc
caccgaattggccgagtgggaagagctgaaaggatgggtctggccatttccctggtggca
acagagaaagaaaaggtttggtaccacgtatgtagcagccgtggaaaagggtgttataac
acgagacttaaggaagatggtggctgtaccatatggtacaatgagatgcagctgctgtct
gagatagaagaacatctgaactgcaccatttctcaggttgaaccagatataaaggtccca
gtggacgaatttgatgggaaagttacctatggtcaaaagagagccgctggtggtggaaac
tataaaggccatgtggatattttggcacctaccgttcaagagttggctgcccttgaaaag
gaggcgcagacatctttcctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga
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