Lynx rufus (bobcat): 124503563
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Entry
124503563 CDS
T08475
Name
(RefSeq) polyadenylate-binding protein 1-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03015
mRNA surveillance pathway
lruf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124503563
09123 Folding, sorting and degradation
03018 RNA degradation
124503563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124503563
03041 Spliceosome [BR:
lruf03041
]
124503563
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124503563
mRNA cycle factors
Stress granule specific factors
124503563
Spliceosome [BR:
lruf03041
]
Complex C
Other components
Complex C specific factors
124503563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_7
RBD_DEAH11
RRM_5
Motif
Other DBs
NCBI-GeneID:
124503563
NCBI-ProteinID:
XP_046924647
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MNASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQ
QPADAERALDTMNFEVIRGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS
TFGNILSCKVVCDNHGSRGFGFVHFETHEAAQQAIVTMNGMLLNDRKVFVGHFKSRRERE
AELGARAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEK
HEEAQKAVTDMNGKEVRGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKN
LDDSIDDEKLRREFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT
KPLYVALAQRKEERKAILTNQYMQRLSTVRALGGPLLGSFQQPASYFLPAVPQSSPAQPP
AQTAYYASSSPMQPAPRWTAQPPRPSSTYPPAASMIRPPAMLRRPPAQVSGVRQASTQVP
PTVPHTQRVANIGTQTTGASGAGYPAPSGPLLTHKYSSATYNHGVQEPAVRIPGQEPLTA
SMLAAAPLHEQKQMIGERLYPLIYDAHTQLAGKITGMLLEIDNSELLLMLESPESLNAKV
EEALAVLQAHQAAELTKVNVL
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagcggtccgggctacccgctcgcctcgctctatgtgggcgacctgcacccc
gacgtgaccgaggccatgctgtatgagaagttctcgcccgccggccccatcctgtccatc
cgcgtgtgccgcgacgtggccacccgccgctcgctgggctacgcctacatcaactttcag
cagcctgccgacgcggagcgggcactggacaccatgaacttcgaagtgatcagaggacag
cccatccgcatcatgtggtcccagcgggacccgggactccgcaagtcgggtgtgggcaac
atcttcatcaagaacctggaggactccatagacaacaaggccttatatgacaccttctcc
acctttgggaacatcctctcttgcaaggtggtgtgtgacaatcacggttcccgaggcttc
ggcttcgtccactttgaaacccacgaggccgctcagcaggccatcgtcaccatgaacggg
atgctgctgaatgaccgcaaagtctttgttggccacttcaagtctcgacgggagagggaa
gcagagctgggagctcgggccatggagttcaccaacatttatgtgaagaacctccacgtg
gacgtggacgagcagggcctacaggacctcttctcccagtttgggaagatgctgagtgtg
aaggtgatgagggatgacagcggccactcccggggcttcggctttgtcaactttgagaag
catgaggaagcccagaaggccgtgacggacatgaatgggaaggaggtgagagggcggcta
ctgtacgtgggccgggcccagaagcgggtggaaaggcagaatgagctgaagcgtaggttc
gagcagatgaagcaggaccggctgacccgttaccagggtgtgaacctgtatgttaagaac
ctggatgactccatcgatgatgagaagctgagaagagagttctctccctatggagtgatt
accagtgccaaggtgatgacagagggtggccacagcaaggggtttggctttgtgtgtttt
tcctctccagaagaggcgacaaaggccgtgacagagatgaacgggcgcatcgtgggcacc
aagccgctgtacgtggccctggcccagcgcaaagaggaacggaaggccatcttgaccaac
cagtacatgcagcgcctgtctactgtgcgggccctgggtggccccctcttgggctccttc
cagcagcccgccagctacttcctgcctgctgtgccccagtcttctcctgcacagcctcct
gcccagactgcgtactatgcgtccagctctcccatgcagcctgcccccaggtggacggcc
cagcctccgagaccctcgtccacctaccctccagctgcctcaatgatccgaccaccagcc
atgttgcggcgccccccggcgcaggtcagcggtgtcaggcaggcctccacccaggtgcca
cccacggtgccccacacccagagagtggccaatattggtacccagaccacaggagccagc
ggggcgggatatcctgcaccaagtgggcctctgctgacacacaaatattcctcagcaaca
tacaaccacggggtccaggagcctgctgtgcgcatcccgggacaggagcccctgacggcg
tccatgctggccgcagcgccactgcacgaacaaaagcagatgatcggtgagcgtctgtac
ccccttatctacgatgcccacacccagctggctggcaagatcacgggcatgctgctggag
atcgacaactcggagttgctgctcatgctggagtcccctgagtccctcaatgccaaggtg
gaagaggctttggcggtgctgcaggcacaccaggccgcggagctgacaaaagtgaatgtg
ctctga
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