Lynx rufus (bobcat): 124503640
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Entry
124503640 CDS
T08475
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04151
PI3K-Akt signaling pathway
lruf04510
Focal adhesion
lruf04512
ECM-receptor interaction
lruf04820
Cytoskeleton in muscle cells
lruf04974
Protein digestion and absorption
lruf05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
124503640
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124503640
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124503640
09142 Cell motility
04820 Cytoskeleton in muscle cells
124503640
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
124503640
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
124503640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lruf00535
]
124503640
Proteoglycans [BR:
lruf00535
]
Extracellular matrix (ECM) proteoglycans
Others
124503640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
124503640
NCBI-ProteinID:
XP_046924778
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MPGKDGRDGVPGLDGEKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGELGRAGELGEAG
PSGEPGIPGDAGVPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGRKGDTGDPGLPGPQG
LRGVTGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPGGPVGPKGESGSRGELGPKGIPG
PNGTSGVDGVPGPPGPVGFQGIQGVPGITGKPGVPGREASEQHIRELCGAMLSEQIAQLA
AHLRKPLAPGSAGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGTQGDR
GDKGSAGAGLDGPDGDQGLQGPQGVPGVSKDGRDGAQGEPGPPGDPGLPGAVGAQGTPGI
CDTSACQGAVMAGGGEKSGSRSS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcaaggacgggcgggacggcgtgcccggactcgatggcgagaagggagaggcc
ggtcgcaacggtgccccaggagagaagggtcccaatgggctgccgggcctccccggacga
gcagggtccaagggcgagaagggagaactgggccgagccggagagctgggtgaggccgga
ccctcgggagagcctggcatcccgggagacgctggcgtgcctggggagcgcggtgaggct
ggccacaggggctcggcgggggctctgggcccgcaaggccctcctggagcccctggcgtc
cgaggcttccagggccggaagggcgacacgggagaccccggcctgccgggcccccagggc
ctccgaggtgtcacgggtgaccggggccccggaggagccgcaggcccgaagggagaccag
ggcattgcaggttctgacggccttcctggggacaaaggagagctgggtcccggtggtccc
gtcggtcccaaaggagagtccggcagtcgaggggagctgggcccgaagggcatcccgggt
cccaacggcaccagcggcgtggatggcgtcccaggcccgcccggccccgtgggtttccag
ggcatccaaggcgtgcctggcatcactgggaagcccggagtcccggggcgagaggccagc
gagcagcacatccgggagctgtgtggggcgatgctcagcgaacaaattgcacagttagca
gctcacctgaggaagcctttagcgccgggatccgcgggccggcctggtccagccggaccc
ccaggtcccccggggccccccggctccatcggccaccccggtgcgcgagggccccctgga
tatcgtggtcccaccggagagctgggagaccctgggcccagagggacccagggagaccga
ggagacaaaggctcggcgggcgcgggtctggacgggcctgacggagaccaggggctccaa
ggaccgcagggcgtgcccggcgtgagcaaggacggccgagacggggcccaaggcgagccc
gggcctccgggagatcccggcctccctggtgctgttggtgctcaggggacccccggcatc
tgtgacacctctgcctgccaaggagccgtgatggcagggggcggggaaaaatccggttct
agaagctcctaa
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integrated database retrieval system