KEGG   Lynx rufus (bobcat): 124503640
Entry
124503640         CDS       T08475                                 
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf04151  PI3K-Akt signaling pathway
lruf04510  Focal adhesion
lruf04512  ECM-receptor interaction
lruf04820  Cytoskeleton in muscle cells
lruf04974  Protein digestion and absorption
lruf05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    124503640
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124503640
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124503640
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124503640
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    124503640
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    124503640
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:lruf00535]
    124503640
Proteoglycans [BR:lruf00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   124503640
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 124503640
NCBI-ProteinID: XP_046924778
LinkDB
Position
Unknown
AA seq 383 aa
MPGKDGRDGVPGLDGEKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGELGRAGELGEAG
PSGEPGIPGDAGVPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGRKGDTGDPGLPGPQG
LRGVTGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPGGPVGPKGESGSRGELGPKGIPG
PNGTSGVDGVPGPPGPVGFQGIQGVPGITGKPGVPGREASEQHIRELCGAMLSEQIAQLA
AHLRKPLAPGSAGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGTQGDR
GDKGSAGAGLDGPDGDQGLQGPQGVPGVSKDGRDGAQGEPGPPGDPGLPGAVGAQGTPGI
CDTSACQGAVMAGGGEKSGSRSS
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgccgggcaaggacgggcgggacggcgtgcccggactcgatggcgagaagggagaggcc
ggtcgcaacggtgccccaggagagaagggtcccaatgggctgccgggcctccccggacga
gcagggtccaagggcgagaagggagaactgggccgagccggagagctgggtgaggccgga
ccctcgggagagcctggcatcccgggagacgctggcgtgcctggggagcgcggtgaggct
ggccacaggggctcggcgggggctctgggcccgcaaggccctcctggagcccctggcgtc
cgaggcttccagggccggaagggcgacacgggagaccccggcctgccgggcccccagggc
ctccgaggtgtcacgggtgaccggggccccggaggagccgcaggcccgaagggagaccag
ggcattgcaggttctgacggccttcctggggacaaaggagagctgggtcccggtggtccc
gtcggtcccaaaggagagtccggcagtcgaggggagctgggcccgaagggcatcccgggt
cccaacggcaccagcggcgtggatggcgtcccaggcccgcccggccccgtgggtttccag
ggcatccaaggcgtgcctggcatcactgggaagcccggagtcccggggcgagaggccagc
gagcagcacatccgggagctgtgtggggcgatgctcagcgaacaaattgcacagttagca
gctcacctgaggaagcctttagcgccgggatccgcgggccggcctggtccagccggaccc
ccaggtcccccggggccccccggctccatcggccaccccggtgcgcgagggccccctgga
tatcgtggtcccaccggagagctgggagaccctgggcccagagggacccagggagaccga
ggagacaaaggctcggcgggcgcgggtctggacgggcctgacggagaccaggggctccaa
ggaccgcagggcgtgcccggcgtgagcaaggacggccgagacggggcccaaggcgagccc
gggcctccgggagatcccggcctccctggtgctgttggtgctcaggggacccccggcatc
tgtgacacctctgcctgccaaggagccgtgatggcagggggcggggaaaaatccggttct
agaagctcctaa

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