Lynx rufus (bobcat): 124503706
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Entry
124503706 CDS
T08475
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124503706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lruf03021
]
124503706
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124503706
Transcription machinery [BR:
lruf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
124503706
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124503706
U7-dependent histone pre-mRNA processing factors
124503706
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
124503706
NCBI-ProteinID:
XP_046924882
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDGSILSVTVDGKTANINLETRMVECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcctgctgaggaaagtgaccagctgctgatccgaccccttggagctggg
caagaagtaggaagatcatgtattatcctggagttcaaaggaagaaaaataatgttggac
tgcgggatccaccctggcctggaaggaatggatgcgcttccttatattgatttaattgac
cccgctgagattgatctcctgttaattagtcatttccatctggatcactgtggagctttg
ccctggtttctacagaagacaagtttcaaaggaaggacatttatgactcacgctacaaaa
gctatttatagatggcttctctcagattatgtcaaagttagtaacatatcagcagatgac
atgctgtacacggagacagatttggaagagagcatggacaaaatcgaaaccatcaacttt
catgaagttaaagaagttgcaggaatcaagttttggtgttaccatgcaggccacgttcta
ggagctgccatgttcatgattgagatcgcgggcgtgaagcttttgtacacaggtgatttc
tcaagacaagaagatagacacttaatggcagctgaaattccgaatattaaacctgacatt
ctcattattgaatctacgtatgggacgcacatccatgagaagcgtgaagagagagaagca
agattctgtaacactgttcatgacattgtaaacagagggggcagaggcctcattcccgtc
tttgctcttggaagggctcaggagctgctcttgatcttagacgagtactggcagaatcac
ccagaactccatgatattcccatatactatgcgtcatctttggccaagaagtgcatggca
gtgtaccagacgtacgtaaatgccatgaacgacaaaatccgcaaacagatcaacatcaac
aatccctttgtgttcaagcacatcagtaacctcaagagcatggatcattttgatgacatt
ggtcccagtgtcgtcatggcctccccgggcatgatgcaaagtggcttatccagagagctc
tttgaaagctggtgcacggataagaggaacggcgtcattatagcagggtactgtgtagaa
gggacacttgccaagcatatcatgtctgaaccagaagaaatcactaccatgtctggacag
aagttaccgctgaaaatgtctgttgattacatttctttctctgctcacacagattaccaa
caaaccagtgaatttatccgtgctttgaaaccgcctcatgtgattttagtccacggagaa
caaaatgaaatggccagattgaaagcagccctgattcgagaatatgaagataacgatgaa
gttcacatagaggttcataatcctcggaacacagaagctgtgaccttgaatttcagagga
gaaaagctagccaaggtcatgggctttttagcagacaaaaaaccagaacaaggccagcgg
gtctcaggaatacttgttaaaagaaactttaattatcacatactttctccttgtgacctc
tccaattatactgacttggccatgagcactgtgaaacagacccaagccattccgtatact
ggtccttttaatttgctctattaccagctacagaagttgacaggtgatgtggaagaatta
gaaattcaagaaaaacctgctctgaaagtattcaaaaatattactgtaatacaggaacca
ggaatggtggtattagaatggttagcaaacccttccaacgatatgtatgcggatacagta
acaaccgtgatcctggaagttcagtcaaacccgaaaatcaggaaaggtgcagtacagaag
gtttctaaaaaattagaaatgcacgtttatagcaaaaggttggagatcatgctccaggac
atatttggagaagactgtgtaagtgtaaaagacggttccattctcagtgtcacagtggat
ggaaaaactgctaatataaacctggagacacggatggtcgaatgtgaggaaggaagcgag
gatgacgagtccctccgggagatggtggagctggccgcgcagagactctacgaggccctc
acgccagttcactga
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integrated database retrieval system
