KEGG   Lynx rufus (bobcat): 124504650
Entry
124504650         CDS       T08475                                 
Name
(RefSeq) autophagy-related protein 13 isoform X1
  KO
K08331  autophagy-related protein 13
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf04136  Autophagy - other
lruf04140  Autophagy - animal
lruf04211  Longevity regulating pathway
lruf05010  Alzheimer disease
lruf05014  Amyotrophic lateral sclerosis
lruf05016  Huntington disease
lruf05017  Spinocerebellar ataxia
lruf05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    124504650
   04136 Autophagy - other
    124504650
 09150 Organismal Systems
  09149 Aging
   04211 Longevity regulating pathway
    124504650
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    124504650
   05014 Amyotrophic lateral sclerosis
    124504650
   05016 Huntington disease
    124504650
   05017 Spinocerebellar ataxia
    124504650
   05022 Pathways of neurodegeneration - multiple diseases
    124504650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lruf04131]
    124504650
   03029 Mitochondrial biogenesis [BR:lruf03029]
    124504650
Membrane trafficking [BR:lruf04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    124504650
   Atg1 complex
    124504650
Mitochondrial biogenesis [BR:lruf03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    124504650
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 124504650
NCBI-ProteinID: XP_046926064
LinkDB
Position
Unknown
AA seq 480 aa
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGG
TYPSVEDSQEVCTTSFSTSPPSQLMVPGKEGGVPLAPNQPAHGAQADQERLATYTPSDGA
RCAATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMF
APKNLELEDADPMVNPPDSPETESPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDD
ILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggaaactgatctcaattcccaggacagaaaggacctggacaagtttattaaatttttt
gccctcaagactgtccaagtgattgtccaggctcgacttggtgagaagatttgtactcgt
tcatcttcatccccgacgggttcagactggttcaatttagcaatcaaagatatcccagag
gttacacatgaagcaaaaaaggccctggcaggacagctgcctgccgttgggagatcgatg
tgtgtggagatctcactcaagacttctgagggagattccatggagctagaaatttggtgt
cttgaaatgaatgaaaagtgtgataaagagattaaagtttcctacacggtgtacaacaga
ctgtcactgctgctgaagtccctccttgccataactagggtcacaccggcttacagactc
tccagaaaacaggggcatgaatatgtcatattgtacaggatatattttggggaagttcag
ctgaatggtttaggagaaggtttccagacagtgcgtgttgggacagtaggcacccctgtg
ggcaccatcactctttcttgtgcttacagaattaacttggcatttatgtctaccaggcaa
tttgagaggaccccacctatcatggggattatcattgatcactttgtggaccgtccgtat
cccagctcctcacctatgcacccctgcaattacagaactgctggtgaggacactggagga
acatatccttctgtggaagattctcaagaagtgtgtaccacctctttctccacctctcct
ccttcccagctcatggttcctgggaaggaaggtggggtacctcttgctcccaaccagcct
gcacacggtgctcaggccgaccaggagagattggcgacctacaccccttctgatggggcc
cgctgtgctgccacaccttccagcagcgaggatactgaaactgtatcaaacagcagtgag
ggccgggcttccccccatgatgtcttggaaaccatctttgtccgaaaagtgggggctttt
gtcaacaagcccatcaaccaggtgaccctgaccagtttggacataccctttgccatgttt
gctcccaagaatttggagttggaggatgccgatcccatggtgaatcctccagattcccca
gagactgaatctcctctccagggcagcctgcactctgatggctccagtgggggtagcagt
ggcaatacccacgatgactttgttatgatcgacttcaaaccggctttttctaaagatgac
attcttccgatggatttggggaccttctatcgtgaatttcaaaatccccctcagctgagc
agcctctccatagatatcggggcacagtccatggctgaggacttggactcactaccagag
aagctggctgtgcacgagaagaatgtccgagaatttgatgcctttgtagaaactctgcag
taa

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