KEGG   Lynx rufus (bobcat): 124504759
Entry
124504759         CDS       T08475                                 
Name
(RefSeq) nuclear RNA export factor 1
  KO
K14284  nuclear RNA export factor
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf03008  Ribosome biogenesis in eukaryotes
lruf03013  Nucleocytoplasmic transport
lruf03015  mRNA surveillance pathway
lruf05014  Amyotrophic lateral sclerosis
lruf05164  Influenza A
lruf05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124504759
   03015 mRNA surveillance pathway
    124504759
   03008 Ribosome biogenesis in eukaryotes
    124504759
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    124504759
   05168 Herpes simplex virus 1 infection
    124504759
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    124504759
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lruf03019]
    124504759
   03009 Ribosome biogenesis [BR:lruf03009]
    124504759
Messenger RNA biogenesis [BR:lruf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     124504759
   mRNA cycle factors
    Stress granule specific factors
     124504759
Ribosome biogenesis [BR:lruf03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    124504759
SSDB
Motif
Pfam: LRR_NXF1-5 NXF_NTF2 Tap-RNA_bind TAP_C NTF2 LRR_4 LRR_8 UBA_8 LRR_9
Other DBs
NCBI-GeneID: 124504759
NCBI-ProteinID: XP_046926240
LinkDB
Position
Unknown
AA seq 618 aa
MADEGKSYNEHDDRVSFPQRRKKGRGPFRWKYGEGNRRSGRGGSGIRSSRLEEDDRDVAM
SDAQEVPRVRYNPYAARPNRRGDSWHDRDRIHVTVRRDRALPERGGAGTSQDGTSKNWFK
ITIPYGRKYDKSWLLSVIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILD
QENRRISIIINSSVPPHSVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQ
NIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSLVQKAPNLKILNLSGN
ELKSERELDKVKGLKLEELWLDGNPLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIA
FDVEAPTTLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGACCSLSIP
FTPQNPSRSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDVNSFVV
DISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELFVRNASP
DEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQ
AFTHLKAKGEIPEVAFMK
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggcggacgaggggaagtcctacaacgagcacgatgaccgtgttagtttccctcaaaga
agaaagaagggccggggtcccttccggtggaaatatggtgaggggaaccgtaggtctgga
agaggaggttctggcattcggtcttcccgcctggaggaagatgacagagatgtagcgatg
agtgatgcccaggaggttccccgagtacgatacaacccctatgctgcccgacccaaccgt
cgaggtgacagttggcatgatcgagaccgcattcatgttaccgtgcggagagacagagct
cttccagagagaggaggggctggcaccagccaggacgggacctcgaagaactggtttaag
attacaattccttatggcagaaaatatgacaagtcatggctcctgagtgtgattcagagc
aagtgcagtgtccctttcacccccatcgagtttcactatgaaaacacacgggcccagttt
tttgttgaggatgccagtaccgcctctgcgctgaaggccgtcaactataagattttggat
caggagaaccgaaggatctctatcatcatcaattcttctgtcccaccccattctgtacag
aacgagctgaagccggaacaagtagagcagctaaagctgatcatgagcaaacgatatgat
ggctcccaacaagcgcttgacctgaagggcctccgttcagacccagacttggtggcccag
aacattgatgttgtcctgaatcgcaggagctgcatggcggccaccctgcggatcatcgag
gagaacatccccgagctgttgtccttgaacttgagcaacaacaggctgtacaggctggat
gacatgtccagcctggtgcagaaagcacccaacctgaagatcctcaacctctccggaaac
gagttgaagtccgagagggagttggacaaggtaaaagggctgaagctggaagagctgtgg
ctcgacggaaacccgctgtgtgacaccttccgagaccagtccacctacatcagcgccatt
cgcgaacgatttcccaaattattacgcctggatggccatgagttaccccctccgattgcc
tttgacgttgaagcccccacgacgttaccaccctgcaagggaagctattttggaacagag
accctgaagaacctggtcctgcatttcttgcagcagtactatgcggtgtatgactctgga
gaccggcagcggctcctggacgcctaccatgacggggcctgctgctccctcagcattcct
tttaccccccagaacccttcccgaagcaacctggccgagtacttcaaggacagcaggaat
gtgaagaagctcaaagaccccaccctgcggttccgcctgctgaagcacacgcgtctcaac
gttgttgccttcctcaatgagttgcccaaaactcagcacgacgtcaactcctttgtggta
gacataagcgcccagacaagcacgttgctgtgtttttccgtcaatggggtcttcaaggaa
gtggatggaaaatctcgggattctttacgagccttcaccaggacatttgtcgctgttcct
gccagcaattcagggctgtgcatcgtaaatgacgagctgtttgtgcgcaatgccagccct
gatgagatccagagagccttcgccatgcctgcacccacaccttcctccagcccagtgccc
accctctccccagagcagcaggagatgctgcaggcattctctacccagtctggcatgaac
cttgagtggtcccagaagtgcctccaggacaacaactgggactacaccagatctgcccag
gcctttactcatctgaaggccaagggcgagatcccagaagtggcgttcatgaagtga

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