Lynx rufus (bobcat): 124504834
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Entry
124504834 CDS
T08475
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04270
Vascular smooth muscle contraction
lruf04360
Axon guidance
lruf04611
Platelet activation
lruf04625
C-type lectin receptor signaling pathway
lruf04810
Regulation of actin cytoskeleton
lruf05135
Yersinia infection
lruf05152
Tuberculosis
lruf05163
Human cytomegalovirus infection
lruf05200
Pathways in cancer
lruf05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
124504834
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
124504834
04625 C-type lectin receptor signaling pathway
124504834
09153 Circulatory system
04270 Vascular smooth muscle contraction
124504834
09158 Development and regeneration
04360 Axon guidance
124504834
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124504834
05205 Proteoglycans in cancer
124504834
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
124504834
09171 Infectious disease: bacterial
05135 Yersinia infection
124504834
05152 Tuberculosis
124504834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lruf04131
]
124504834
Membrane trafficking [BR:
lruf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124504834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
COS
Pept_S41_N_bact
AAA_23
Motif
Other DBs
NCBI-GeneID:
124504834
NCBI-ProteinID:
XP_046926370
LinkDB
All DBs
Position
Unknown
AA seq
1543 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSASHDFDPTDSSSKKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVESSVIGHMSPIMTSPHSPG
ASGNMERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYNRTPAQRLLKEIQ
EAKKHIPQLQEQLSKATGSAQDGAVVTSSRSLGDPPTVSEVEADPGDGLGRIDYSSGDAS
RPSSDSAESPKSALKERIYLEENPEKSEVIQDTDTQSLIGSPSPRMAPHIIGAEDDDFGT
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
VFLEFHQFFLDRSAHLKVSVPDEISIDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHL
EDFRQKRSMGLTLAESELTKLDAERDKDRVTLEKERACAEQIVAKIEEVLMTAQAVEEDK
SSTMQYVILMYMKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFPSI
LGPPRRPSRHDNSAIGRAMELQKQRHPKHLSTPSSVSPEPQDSAKLRQSGLAGEGTDVGY
LPANSMSSGASGATLSQEGGKENDLGSKQVGETPASGDCMDGAPRTPNTIFDFPPPPLDQ
VQEEEWEVERVPEHGTPKPFRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLG
LKPCEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQ
LHIGLNEQMKAVRKRNETSVIDQIGEDLLTWFSGPGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPMEREKV
KKAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKM
IHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVI
KLNTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSAK
PIPLPQSPPCEGDNDEEEPPKLKVEHHSISVPGLQSPDRDLGLESPLISSKPQSHSLGAS
GKSEVDDLFVAERQFAKERHADGTLQEAGASYQIPIPDPHLPASEERWALDALRNLGLLK
QLLVQQLGLAEKSTQEDWSRFLRYGTASSGVQTDSVTQNSENSKACPPGEGQVSFRTESG
DISTCYSPRTSTESSAPRDSVVLAFQDSQASNILVMDHMIMTPEMPPAEPEGSLDESGEH
FFDAREAHSDDNPSEGDGVVKKEEDVNLRISGNYLILDGYDAVQESSTDEEVASSLPPPP
TTGAPPTDSAGQQQHSPQNAHSDGALSPFTPEFLVQQRWGAMEDSCFEIQSPPSCADSQS
QIMEYIRKIEADLEHLKKVEESYNILCQRLAGSALTDKHSDKS
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacacagtccactatcaccgacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaaccgagagtcaccaacagataagaagcagaaagttgagcgcagtgca
tcgcatgattttgatcccacagatagctcctccaagaagacaaagtctagttcagaggag
agtagatccgagatatatggtcttgttcagcgttgtgtgatcatccagaaggatgacaat
ggatttgggctgacggtcagtggagacaatccagtcttcgtacagtctgtcaaagaagat
ggagcagccatgcgggctggagtacagacaggtgatcgaatcatcaaggtgaatggtaca
ttggtgactcattcaaaccatttggaagtggtgaagctaatcaaatctggttcctatgta
gctctcactgttcagggacgcccacctgggtcgccccagattccacttgccgattctgaa
gtagagtcatcagtcattggacatatgtctcccatcatgacatcccctcattcacctgga
gcatctgggaacatggagagaattactagtcctgtgctcatgggggaggaaaacaatgtg
gttcataaccagaaagtagaaattctgagaaaaatgttacagaaagaacaagaacggctg
cagttattgcaggaagattacaaccgaacacctgcccaaagattgctaaaagagatccaa
gaggccaagaaacacattcctcagctgcaagagcagttatccaaagccacaggctctgct
caggatggagctgtagttacgtcctccaggtctttaggtgaccccccgacagtcagtgag
gtagaagcagaccctggtgacggactagggagaattgactacagcagcggagatgcttct
cggcccagtagtgacagcgcagaaagtcccaagagtgccctgaaagagaggatttatcta
gaggaaaacccagagaaaagcgaagtgattcaggacactgacactcagtcactcattggg
agcccctctccccgaatggcacctcatattattggagcagaggatgatgattttggtact
gaacatgaacagatcaatgggcagtgcagctgtttccagagcattgaactgctaaaatct
cgccctgctcacctggctgttttcttacaccatgtagtttcacagtttgaccctgcaacg
ttgctctgttatctctattcagacctatataagcagaccaattccaaggagactcggcgt
gtcttcctcgagtttcatcagtttttcctggatcgatctgcacacctgaaagtttctgtt
cctgatgaaatatcaatagatctcgaaaaaagaagacctgagcttatacctgaggatcta
caccgccactatattcaaactatgcaggaaagagtccacccagaagttcagaggcacttg
gaagattttcggcagaaacgtagcatggggctgaccttggctgaaagcgagctgacaaaa
ctcgatgcggagcgagacaaggaccgggtaactttggagaaggaacgggcatgtgcggaa
cagattgttgccaaaatcgaagaagtgttgatgactgctcaggctgtagaagaagataaa
agttcaacaatgcagtatgttatccttatgtacatgaagcatttgggagtaaaagtgaaa
gaacctcgaaatttggagcacaagcgaggtcggattggattccttccaaaaatcaagcaa
agtatgaagaaagatcgagaaggcgaagaaaaagggaagcgcagaggattccccagcatc
ctgggacccccaaggagaccaagccgtcatgacaacagtgcaattggcagagctatggaa
ctacagaagcagcggcaccctaagcacttatccacaccctcttctgtgagtcctgagcct
caggactctgccaagttgcgccagagtgggttagcaggtgaaggaacagacgttgggtac
ctgccagccaattccatgtcctctggggcctcaggggccactctttcccaggaaggaggg
aaagagaatgatctgggatcaaagcaagttggagaaacacctgcatctggagactgcatg
gatggcgcccctcgcactcccaataccatcttcgatttcccacctcctccgttagaccaa
gtgcaggaggaggagtgggaggtggaaagggtgcctgaacatgggacaccaaagcccttt
cgaaaattcgacagcatagcttttggagaaagtcaaagtgaggatgaacagtttgaaaat
gacttagagacagatccacccaactggcaacagctcgttagtcgagaagtgttactggga
ctaaagccttgtgagatcaaaagacaggaagtaattaatgaattgttctacactgaaaga
gctcatgttcgaacactgaaggttcttgatcaagtgttctaccagcgagtatccagagaa
ggaattctgtcaccttcagaactacggaaaattttttcaaacttggaagatattcttcaa
cttcacattggattgaatgagcaaatgaaggctgttcgcaagaggaatgagacctcagtt
attgatcagattggggaagatttactgacctggttcagcggaccaggggaggagaagttg
aaacacgctgctgccaccttttgcagtaaccaaccttttgccctggaaatgatcaagtct
cgtcagaaaaaggattcccgatttcagacttttgtgcaagatgccgagagcaatccgctg
tgtcgtcgtctgcagctgaaggatatcattcctacccaaatgcagaggcttactaagtac
cctcttctgttagataatattgccaaatacacagaatggccaatggaaagggagaaggtg
aagaaagctgcagatcactgtcgtcagatcttaaactatgtaaatcaggctgtcaaggag
gcagaaaataagcagcgcttagaagactatcaacgtcgcctcgatacctccaatctgaag
ttgtcagagtacccaaatgtggaagagctcaggaatttggatttaacaaaaaggaagatg
attcatgaagggccactggtctggaaggtgaatcgggataaaactattgatctgtacaca
ttgctgctggaagacattcttgtattgttacaaaaacaggatgacagactggtgttacga
tgtcatagtaagattctggcatctacagctgatagcaaacacacgtttagccctgtcatt
aagttgaatacagtgttggttcgacaagtggcaacagataacaaagctttgtttgtcatc
tccatgtcggacaatggggcccaaatttatgaactggtggcacagacagtttctgaaaag
actgtctggcaggaccttatctgccggatggccgcatcagtgaaggaacagtcggcgaag
ccaatcccactgccccagtcgccaccttgcgaaggagacaacgatgaagaagaacctcca
aaattaaaagtggagcatcatagcatttcagtccctggtctgcagagtccagacagagat
ttgggattagagtctcccttaatatcgtcaaaacctcagtctcattcactgggtgcctct
gggaagtccgaggtagatgatctgtttgtggctgagagacagtttgctaaggagcggcat
gcagatgggactctgcaggaagctggagcaagttaccaaatcccaatcccagacccgcac
ttgcctgcctcagaagaacggtgggccttggacgcactaaggaatttgggcttgttgaag
cagttgcttgtacaacagctgggtttggctgagaagagcactcaggaagactggtcacgt
ttcctgagatacggaacagcatcttccggggtgcagacagacagtgtaacccagaactct
gaaaatagtaaggcctgtcctcctggtgaaggacaggtgtcctttagaactgaaagtggt
gacatttccacttgttacagtccacggacttcaactgaatcttctgctccacgagattca
gtggtactggcattccaagatagccaggcaagtaacattttagtaatggaccacatgatt
atgaccccagagatgcctcctgcagagccagaagggagtcttgatgagagtggagagcac
ttttttgatgcccgggaagcacatagtgatgataatccatcagaaggtgatggagtggtt
aagaaggaagaggatgttaatttgcgcatctcaggaaactatttgatccttgacggctac
gatgcggtgcaggagagctccacagatgaggaggttgcttcctcactccccccaccgccc
acgacaggcgccccccccacggactctgccggccagcagcagcattctccccagaacgcc
cattccgatggggcgctctcaccgttcaccccagaattcctggtccagcagcgctgggga
gctatggaggattcctgttttgagatccagagtcccccgtcttgtgcagactcacaaagc
cagatcatggagtacattcgtaagatcgaggctgaccttgaacacttaaagaaggtggag
gaaagttacaacattctttgccaaaggctggctggatcagccctcacagacaagcactca
gataaaagttag
DBGET
integrated database retrieval system
