Lynx rufus (bobcat): 124505252
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Entry
124505252 CDS
T08475
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03013
Nucleocytoplasmic transport
lruf05014
Amyotrophic lateral sclerosis
lruf05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124505252
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
124505252
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124505252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124505252
03036 Chromosome and associated proteins [BR:
lruf03036
]
124505252
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124505252
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124505252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
ANAPC3
Motif
Other DBs
NCBI-GeneID:
124505252
NCBI-ProteinID:
XP_046927091
LinkDB
All DBs
Position
Unknown
AA seq
1816 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQSTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTNSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTSGLFGSSPATSSATGL
FSSSTTNSGFAYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTQNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQPNTGFGAV
GSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNTSGSSIF
GSKPGPGTLGTGLGAGFGTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGFG
APQAPVALTDPNASAAQQAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLNNSNLFSPVNRDSEDLASPSDYPENGERFSFLSKPVDENHQQDGDDDSLVSRFYT
NPIAKPIPQTPESAGNKHNSSSSVDDTIVALNMRAALRNGLEGSSEETSFHEESLQDDRE
EIENNAYHMHPAGIVLTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGD
VNLTNLNLDDIVHIRRKEVIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSP
DRLADMNYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEERPSKTS
TKKLKTAPLPPAGQATPFQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLD
SMLEECVPEDQEPVSASTHIASSLGINPHVLQIMKASLLADEEDVDTVMDQRFSHLPSKT
DTSQEICSPRLPISASHSSKSRSLVGGLLQSKFTSGAFLSPSASVQECRTPRASSLMNIP
STCPWSVPPPLTSVFTVPSPAPEVQLKTVGTRRQPGLVPLEKSVTYGKGKLLMDMALFMG
RSFRVGWGPNWTLANSGEQLSGCHELENHQNADSMEYGFLPNPVAVKSLTESPFKVRLEK
LSLRQKPDEDLQLYQIPLELKLKHSTVHVDELCPLIVPNPGVAVIHDYANWVKKASGDFL
EAQIVKHWSLAWTLCEALWGHLKETDSQLDEPNEYIQILERRRTFSRWLSYTAAPQIEEE
VSLTRKDKPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQLVGSQSIRELLTMQLVD
WHQLQANSFIQDERLRIFALLAGKPVWQVSEERQINVCSQLDWKRSLAVHLWYLLPPTAS
ISRALSMYEEAFQNSSEAESYACSPLPSYLEGSGCVIEEEKNSQRPLQDVCFHLLKLYSD
RHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSDQCEGVLQASFAGQLESEGL
WEWAIFVFLHIDNSSVRENAVRELLTRHCQLLETPESWAKETFLTQKLCVPAEWINEAKA
VRAHMESDKHLEALYLFKAGHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSS
LIQDWETSGLVYLDYIRVMEMLHQIQQMDCSVYEMEQLHTKVTSLCNRIQQIQCYNAKDR
LAQSDMAKRVANLLRVVWSLRHAPDATSDSTPDPQRVPLRLLAPHVGRLPMPEDYALEEL
RGLTQSYLRELTVGSQ
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcatttggaacgccctttgggggtggcactggtggctttggcacaact
tcaacatttgggcagagtactggttttggtactactagtggaggggcttttggaacatct
gcatttggttctagcaacaatactggaggcctctttggaaattcacagaccaaaccagga
ggattatttggtactaattcatttagtcagccagctacttccacaagcactggctttggg
tttggcacatcaacaggaacatcaaatagcttgtttggaactgcaagtacagggactagt
ctcttctcatcccaaaacaatgcctttgcacaaaataaaccaactggcttcggaaatttt
ggaacaagtaccagcagtggaggactttttggtactacaaataccacctccaatcctttt
ggtagtacatctggctccctctttgggccgagtagttttacagctgctcccactgggact
acgattaagtttaatcctccgactggtacagatactatggttaaagctggagttagcact
aacatcagtaccaagcaccagtgtattactgctatgaaagaatatgaaagcaagtctcta
gaggaacttcgtttagaggattatcaggctaaccggaaaggcccgcagaaccaggtggga
gcaggtaccacatctggcttgtttgggtcttctccagccacctccagtgcaacaggactc
ttcagctcctctaccactaactcaggctttgcatatggtcagaacaaaacagcctttgga
actagtacaactgggtttggaacaaatccgggtggtctctttggccaacagaatcagcag
actaccagcctcttcagtaaaccatttggccaggccacaaccacccagaacactggcttt
tcctttggtaataccagcacactaggacagccaagtactaataccatgggtttatttgga
gtaacccaagcctcacagcctggaggtctttttgggacagctacaaacaccagcactggg
acagcgtttggaacaggaacaggtctctttgggcagcccaatactggatttggtgctgtc
ggttcgaccctgtttggcaataacaagcttactacatttggaaccagcacaaccagtgct
ccttcatttggtacaaccagtggcgggctctttggtaacaaaccaaccctgactttagga
accaatacaaacacttccaattttggtttcggcacaaataccagtgggagtagtattttt
ggaagtaaaccaggacctgggactctgggaactggccttggtgcaggatttggaacagct
cttggtgctggacaggcatctttgtttgggaacaaccaacctaagatcggagggcctctt
ggtacaggagcctttggggcccctggatttaatactacgacagctactttgggctttgga
gccccccaggccccagtagctttgacagatcccaatgcttctgctgcccagcaagctgtt
ctccagcagcatatcaatagtctaacatactcaccttttggagattctcctctcttccgg
aatcccatgtcagaccctaaaaagaaagaagagagattgaaaccaacaaatccagcagcc
cagaaggctctcactacacccactcattataaactaacaccccgtcctgccaccagagtt
cgaccaaaggctttacagacaacaggcacagcgaagtcccatctgtttgacgggctggat
gatgatgagccatccttagccaatggagcattcatgcctaagaagagcattaagaagttg
gttttgaaaaaccttaacaacagcaatctcttttctcctgttaatcgtgactccgaagat
ctcgcttcaccatctgattatccagaaaatggggagaggttcagtttcctgagcaaacct
gttgatgagaaccatcagcaggatggagatgatgattctcttgtgtcacgtttttatact
aaccctattgccaaacccattcctcaaaccccagagagtgctggaaataaacacaacagc
agtagcagtgtggatgataccattgttgcactaaacatgcgtgctgccttgcgaaatggg
ctggaaggaagcagtgaagagacctcttttcatgaggagtcactgcaggatgacagagaa
gaaatagaaaataatgcttaccatatgcatccagcaggcattgttctcactaaggttggt
tactacactattccatctatggatgaccttgccaaaattaccaatgaaaaaggagaatgc
attgtctctgacttcactattggtcgtaaaggttatggttcaatctattttgaaggagat
gtgaatttgacaaatctaaatttggatgatattgtgcatattcgaaggaaagaagtgatt
gtctacttagatgataaccaaaaaccacctgtgggtgaagggctaaataggaaggccgaa
gttacactggatggagtttggccaacggataaaacatctcgctgtttaataaagagccca
gatcgacttgctgatatgaactatgagggcagattggaagcagtttcaaggaaacaggga
gctcaattcaaagagtaccgtcccgaaacaggttcttgggtgtttaaggtctcccatttc
tctaagtatggccttcaggattctgatgaagaagaggaggaacggccatccaaaactagt
acaaagaagttgaagactgcccctttgcctcctgcaggccaggccaccccattccagatg
gctcttaatggcaagccagcacctccaccccagagccagagcccagaggtggagcagtta
gggagggttgtggaactggacagtgacatggtagatatcacccaggagccagttttggat
tccatgttagaagagtgcgtgcctgaggatcaggaacctgtgtctgcctcaacacacatt
gcatcttcactgggaattaatccacatgtcttacagatcatgaaagcatcattgcttgct
gatgaagaagatgtagatacggtcatggatcaacgcttcagtcaccttccttctaaaaca
gatacttctcaagaaatctgttctcccagactccccatttcagcatcccactcgtcaaaa
tcccgttctttagttggtgggttactacaatcaaagtttactagtggagcttttctttca
ccaagtgcctctgtacaagaatgtcgcacccccagagcatcgtctttgatgaatattcca
tccacatgcccttggtctgtccctccacccctcacctctgtgtttacagtgcccagccca
gcccctgaagttcagttgaaaaccgtgggtacacgtagacaaccaggcctagtccctctt
gaaaagtctgtcacctatggcaaggggaaactcttgatggatatggctctgtttatggga
cgctcatttcgagttggttggggccccaactggactcttgctaatagtggagaacagctg
agtggctgtcatgaactggaaaatcatcaaaatgccgattctatggaatatggattcctg
cctaatccagtagctgttaaatccctaacagagtctccattcaaagttcgtttggaaaaa
ctcagtttgagacaaaagccagatgaagacctgcagttataccaaatacctctggagctc
aaattaaagcacagcactgtccatgtagatgagctgtgtcctctcattgtccctaatcca
ggagttgctgtcattcatgactatgcaaattgggttaagaaagcttctggagactttttg
gaagcacaaattgtgaagcactggagcctagcatggacattatgtgaagccttatggggc
cacctgaaggagactgacagccagctggatgaacccaatgaatacattcagattctggag
cgaagaagaactttctctcgctggctatcctatactgccgcacctcaaattgaggaggaa
gtctccttaacccgaaaagacaagcctgtggaggctgtcttcagctacctcacaggcaag
aggatcagtgaggcctgctctctggcccagcagtcaggtgatcatcgtcttgcccttctt
ttatcccagttggtgggcagccagtcgatccgggagctgcttaccatgcagctggtggat
tggcatcagctccaggctaactctttcatccaggacgagagactgcggatctttgccttg
ttggctggaaaaccggtatggcaggtctccgaggagaggcaaatcaacgtgtgctcacag
ttggactggaaacgctccctcgctgtccatctttggtatttgcttccacccacagcctcc
atttccagggcactcagcatgtacgaagaagcatttcagaattcttctgaggctgagagt
tatgcctgctccccacttccttcatacctagaaggctctggctgtgtgatagaggaggag
aaaaactcacagagaccacttcaagatgtctgctttcaccttctaaaactctacagtgac
agacattatgatctcaaccagctgttggagcctcgaagcataacagcagatcctttggat
taccgcctaagctggcacttgtgggaggtgctgcgggctcttaactatactcatctctca
gaccagtgtgagggtgtgctgcaggccagttttgctggccaactggaaagtgagggcctc
tgggagtgggccatctttgtcttcctgcatattgacaactcaagcgtgcgtgagaatgct
gttcgagagctgcttacccggcactgccaactattggagacccctgagtcttgggctaag
gagactttcctgacccaaaagctttgtgtgcctgctgagtggattaatgaggccaaagca
gtgagagcacacatggaatctgacaagcatttggaggccctctatttgtttaaagctgga
cactggaaccgctgccacaaactcatcatcaggcacttagcttctgatgccatcattaat
gagaactatgactacctgaaggggttcttggaagacttggcacctccagagcgcagcagc
ctaatccaggactgggaaacatcaggacttgtttacttggactatattcgggtcatggag
atgcttcaccagatacagcagatggattgctcggtttatgagatggagcagttacacacc
aaagtgacctcactgtgcaaccgcatacagcagatccagtgttacaatgccaaggatcgc
ctggcccagtcagacatggccaaacgtgtagccaacctgctgcgggtggtatggagcctt
cggcatgcccctgatgcaacctccgactcaacaccagaccctcagcgagtccctttgcgt
ctcttggctccccacgttggccgactccccatgcctgaggactatgccttggaggaactg
cgtggtctcacacagtcctacctgcgagaattgactgtgggaagccagtga
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integrated database retrieval system
