Lynx rufus (bobcat): 124505257
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Entry
124505257 CDS
T08475
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lruf04515
]
124505257
Cell adhesion molecules [BR:
lruf04515
]
Immunoglobulin superfamily
Other
124505257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
C2-set_3
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
124505257
NCBI-ProteinID:
XP_046927110
LinkDB
All DBs
Position
Unknown
AA seq
1917 aa
AA seq
DB search
MRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITHHGGLYISDVQKEDALSTY
RCITKHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWAGHTVELPCTASGYPIPA
IRWLKDGRPLPADSRWTKRITGLTISDLRTEDSGTYICEVTNTFGSAEATGTLTVIDPLH
VTLTPKKLKTGIGSTVILSCALLGSPEFTIRWYRNTELVLPDEAVSIRGLSNETLLITSA
QKSHSGAYQCFATRKAQTAQDFAIIVLEDGTPRIVSSFSEKVVNPGEQFSLMCAAKGAPP
PTVTWALDDEPIVRDGSHRTNQHTMSDGTTISHMNVTGPQIRDGGVYRCTARNSVGSAEY
QARINVRGPPSIRAMKNITAVAGRDTLINCRVIGYPYYSIKWYKDALLLPDNHRQVVFEN
GTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQPFEFPPASIGQLLYIP
CVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAA
TVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGSPQQYH
PVPLTGRTQILANSSLLIRHVLEEDMGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPN
TTIAIKGHAKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAIATKDNGDEVVSTLKLKP
ADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSI
ITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKE
LTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQ
YSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPEN
VRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQNITTTRERVELRG
MEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAVPSSASSVVVSWLPPAK
PNGVIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQYLLWVAAVTSAGRGNS
SEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGDPAPAVKWTKDSEDSAIPVSM
DGHRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLVQVPPDQPRLTVSKTSA
SSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSGERSFKLDSLKCGTWYKVKLA
AKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQGWNNGGCPITAIVLE
YRPKGTWAWQGLRANSSGEVFLTELREATWYELRMRACNSAGCGNETAQFATLDYDGSTI
PPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFIVRKKRKEKRLKRLRDAKSLAEMLIS
KNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKATIPVTDAEFSQAVNPQ
SFCTGVSLHHPALIQSTGPLIDMSDIRPGTNPVSRKNVKSAHSTRNRYSSQWTLTKCQAS
TPARTLTSDWRTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYE
HAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTPSEPGICRFTASPPKP
QDADRGKNVAVPIPHRANKSDYCNLPLYAKSEAFFRKADGREPCPVVPPREASIRNLART
YHTQARHLTLDPASKPLGLPHPGAPAAASTATLPQRTLAMPAPPAGTAPPAPGPTPAEPP
AAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGVGRSQKQGAGAYSKSYTLV
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggaaacgtggccgtcttcaagtgcctcatcccctcctcagtgcaggaatatgtt
agcgttgtgtcctgggagaaggacacggtctccatcatcccagaaaacaggttttttatt
actcaccacggcgggctgtacatctcggacgtgcagaaagaggacgccctctccacctac
cgctgcatcaccaagcacaaatatagcggggagacccggcagagcaatggggcccgcctc
tctgtgacagaccctgccgagtcgatccccaccatcctggacggcttccattcccaggaa
gtgtgggccggtcacaccgtggagctgccctgcacggcctccggctaccccatccctgcc
atccgctggctcaaggacggccgccccctcccggccgacagccgctggaccaaacgcatc
acagggttgaccatcagtgacctgcggactgaggacagcggcacctacatttgtgaggtc
accaacacctttggctcagcagaggccacaggcaccctcacagtcattgacccccttcac
gtgaccctgacaccaaagaagctgaagaccggcatcggcagcacggtcatcctgtcctgt
gccctgctgggctccccggagttcaccatccgctggtaccgcaacactgagctggtgctg
cccgacgaggccgtctccatccgcggtctcagcaacgagacgctgctcatcacctcggcc
cagaagagccactccggggcctaccagtgcttcgccacccgcaaggcccagaccgcacag
gacttcgccatcattgtgctggaggatggcacgccccgcattgtctcgtccttcagcgag
aaagtggtcaaccccggggagcagttctcgctgatgtgtgcggccaagggcgccccgccc
cccaccgtcacctgggccctggacgacgagcccatcgtgcgggacgggagccaccgcacc
aaccagcacaccatgtccgacggcaccaccatcagccacatgaacgtcacgggcccccag
atccgcgacgggggcgtataccggtgcacggcgcggaactcggtgggcagtgctgaatat
caggcgcgaataaacgtaagaggcccccccagcatccgggcgatgaagaacatcacagct
gtcgccgggcgggacacccttatcaactgcagggtcatcggctacccctactactccatc
aagtggtataaggacgccctactgctgcccgacaaccaccgccaggtggtgttcgagaac
gggaccctgaagctgaccgatgttcagaagggcatggacgagggcgagtacctgtgcagc
gttctcatccagccccagctgtccatcagtcagagtgtccacgtggccgtcaaagtgccc
cctctgatccagccctttgagttcccacctgcctccatcggccagctgctctacatcccc
tgcgtggtgtcctcgggggacatgcccatccgtatcacctggaggaaggacggacaggtg
atcatctcaggctcgggcgtgaccatcgagagcaaggaattcatgagctccctgcagatc
tccagcgtctccctcaagcacaacggcaactacacgtgcatcgccagcaacgcggcggcc
accgtgagccgggagcgccagctcatcgtgcgtgtgccccctcgatttgtggtgcagccg
aacaaccaggacggcatctatggcaaagctggtgtgctcaactgctcagtggatggctac
cccccgcccaaggtcatgtggaagcatgccaaggggagcgggagcccgcagcagtaccac
ccggtgcccctcaccggccgcacccagatcctggccaacagctcgctgctgatccgccac
gtcctggaagaggacatgggctactacctctgccaggccagcaacggcgtgggcaccgac
atcagcaaatccatgttcctcaccgtcaagatcccggccatgatcacctcccaccccaac
accaccatcgccatcaagggtcacgccaaggagctcaactgcacagccaggggtgagcgg
cccatcataatccgctgggagaagggggacacggtcatcgaccccgaccgagtcatgagg
tacgccatcgccaccaaggacaacggcgatgaggttgtctccacgctgaagctcaagcca
gctgaccgtggggactctgtgttcttcagctgccacgccatcaactcatatggggaggac
cggggcttgatccaactcactgtgcaagaaccccctgaccccccagagctggagatccgg
gaggtgaaggcccggagcatgaacctgcgctggacccagcgattcgacgggaatagcatc
atcacgggcttcgatattgaatacaagaacaaatcagattcctgggacttcaagcagtcc
acacgcaacatctcccccaccatcaaccaggccaacatcgtggacttgcacccagcctct
gtgtacagcatccgcatgtactccttcaacaagattggccgcagcgagccgagcaaagag
ctcaccattagcaccgaggaggccgctcctgatgggccccccatggatgtcaccttgcag
ccagtgacctcacagagtatccaagtgacctggaaggcgcccaagaaggagctgcagaat
ggcgtcatacggggctaccagatcggctacagagagaacagccctggcagcaatgggcag
tatagcatcgtggagatgaaggccaccggggacagcgaggtctacaccctggacaacctc
aagaagtttgcccagtacggggtggtggtccaagccttcaatcgggctggcacagggccc
tcgtccagcgagatcaatgccaccacgctggaggatgtgcccagccagccccccgagaac
gtccgggccctgtccatcacctcagatgtggcggtcatctcctggtcagagcccccacgc
agcactctcaatggcgtcctcaaaggctatcgtgtcatcttctggtccctctacgtggat
ggggagtggggcgagatgcagaacatcacgacgacgcgggagcgggtggagctgcggggc
atggagaagttcaccaactacagcgtgcaggtgctggcctacacccaagccggggacggc
gtgcgcagcagcgtgctgtatatccagaccaaggaggatgttccaggtccccctgcaggc
atcaaagctgtcccttcgtccgccagcagtgtggttgtctcttggctccccccagccaag
cccaacggggtgatccgcaagtacaccatcttctgctccagccctgggtccggccagccg
gctccgagcgagtatgagacgagtccagagcagctcttctaccggatcgcccacctaaac
cgtgggcaacagtacctgctgtgggtggccgccgtcacctctgccggccggggcaacagc
agcgagaaggtcaccattgagcctgcgggcaaggccccagcgaagatcatctcattcgga
ggcaccgtgacaacaccctggatgaaagacgtccggctgccctgcaattcagtgggagat
ccagcccctgctgtgaagtggaccaaggacagtgaagactcggccatccctgtgtccatg
gacgggcaccggctcatccataccaacggcacactgctgctgcgtgctgtgaaggctgag
gactcaggctactacacctgcacggccaccaacactggaggcttcgacaccatcatcgtc
aaccttctggtgcaagttcccccggaccagccccgcctcactgtctctaaaacctccgct
tcatccatcaccctgacctggattccaggtgacaatgggggcagctccatccgaggcttc
gtgctgcagtactcggtggacaacagcgaagagtggaaggatgtgttcatcagctcaggg
gagcggtccttcaagctggacagcctcaagtgtggcacgtggtacaaggtgaagctggca
gccaagaacagcgtgggctccgggcgcatcagcgagatcatcgaggcaaagacccacggg
cgggagccctccttcagcaaagaccagcacctgttcacccacatcaactccacgcatgct
cggcttaacctgcagggctggaacaacgggggctgccctatcacagccatcgtcctggag
taccggcccaagggcacctgggcctggcaggggctgcgggccaacagctccggggaggtg
tttctgactgagctgcgcgaggccacgtggtacgagctgcgcatgcgggcctgcaacagc
gccggctgcggcaacgagactgcccagttcgccaccctggactacgacgggagtaccatc
cctcccatcaagtctgctcaaggtgagggggatgatgtgaagaagctgttcaccattggc
tgcccggtcatcctggccactctgggggtggcactgctcttcatcgttcgcaagaagagg
aaggagaagcggctgaagcggctccgagatgcaaagagcttggcagaaatgttgataagc
aagaacaaccgaagttttgacacccctgtgaaggggcctccccaaggcccgcggctacac
attgacatccccagggtccagctgctcatcgaggacaaggagggcatcaagcagctggga
gatgacaaagccaccattcctgtgacggatgctgagttcagccaagctgtcaacccgcag
agtttctgcactggtgtctccttgcaccacccagccctcatccagagcacaggacccctc
atcgacatgtctgacatccggccaggcaccaatccagtgtccaggaagaacgtcaagtca
gcccacagcacccggaaccggtactcaagccagtggacgctgaccaagtgccaggcctcc
acgcctgcccgcaccctcacctctgactggcgcaccgtgggatcccagcatggtgtcact
gtcactgagagtgacagctacagtgccagcctctcccaggacacagacaaagggcggaac
agcatggtgtccaccgagagtgcctcgtccacgtacgaagagctggctcgggcctacgag
cacgccaagctggaagaacagcttcagcacgccaagttcgagatcaccgagtgcttcatc
tccgacagctcctccgaccagatgaccacaggcaccaacgagaacgcggacagcatgacg
tccatgagcacgccctcagagcccggcatttgccgctttaccgcctccccgcccaagccc
caggatgccgaccgaggcaagaacgtggctgtgcccatcccgcaccgggccaacaagagt
gactactgtaacctgcccctgtatgccaagtcggaggccttctttcgaaaggcagatggg
cgcgagccctgtcccgtggtcccaccccgagaggcttccatccggaacctggctcgaacc
taccacacccaggctcgccacctgaccttggaccctgccagcaagcccttgggcctcccg
cacccaggggcccctgctgccgcctccacagccactttacctcagaggaccctggccatg
ccagcacccccagccggcacggcccccccagctcccggccccacccctgccgagcccccc
gcggcccccagtgccgcccctccggcccccagcaccgagcctccgcgggccgggggccca
cacaccaaaatggggggctccagggactcacttctcgagatgagcacatcgggggtaggg
agatcccagaagcagggggcaggggcctactcgaaatcctataccctggtgtag
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integrated database retrieval system
