Lynx rufus (bobcat): 124505260
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Entry
124505260 CDS
T08475
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124505260
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
124505260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_4
DUF3723
Motif
Other DBs
NCBI-GeneID:
124505260
NCBI-ProteinID:
XP_046927114
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MGLKDHLGHDLGHLYVESTDPHLSTSVPWSMVEKPTMDKVNSGKEEKEVSEENVSSGDSE
ESTNSDNESDQSRSISAEPCLLTKTHRQLCRSPCLEPHILKRSDILQDFKPEESQTTSKE
VKKPPDVVREYQTKLEFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKSEAEQT
VSTVNSLTREAPSLESQRSDSPMQELVADDGENLRPVVIDGSNVAMSHGNKEVFSCRGIK
LAVDWFLERGHKDITVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRV
VCYDDRFIVKLAFESDGVIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPL
GRHGPSLDNFLRKKPIVPEHKKQPCPYGKKCTYGHKCKYYHPERGSQPQRSVADELRAMS
RNTAAKTANEGGLVKSNSVPCSTKADSASDVKRGAPKRQSDPSIRTQVYQDLEEKLPTKN
KLETRSVPSLVSIPATATAKPQSATSLSNGLPSGVHFPPQDQRPQGQYPPMLMATKNHGT
PMPYEQYPKCDSPVDIGYYSMLNAYSNLSVSGPRSPERRFSLDTDYRVSSVASDCSSEGS
VSCGSGDSYVGYGDRPYVSSPDPQLEESLKCQHVHPHSRLNSQPFLQNFHEPVTRVQSYS
HEEPKYHPKAPLPHLAVHLQHPAVGARASCPGDYPSPPGSAHSKAPHLGRALVATRIDSI
SDSRLYDGSPSRQRKPYSHPEGPGGWERPGYGVDAYGYRQTYSLPDSSTQPCYEQFTFQS
LPEQQEPAWRVPYCGPPAEPPRYQDSREKVYVNLCNIFPPDLVRTVMKRNPHMTDAQQLA
AAILVEKSQLGY
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgaaggatcatctggggcatgacctaggccacctttatgtggagagcactgac
ccacatttaagtacatctgtaccttggtcaatggtggaaaagccaacaatggataaggtt
aattccgggaaggaagagaaagaggtgtctgaagagaatgtgagctctggtgactctgaa
gaaagcacaaattccgataacgagtcagaccagtcgagaagcatttcagcagagccatgc
ttattaaccaagactcacagacaactgtgtaggtctccctgcttagagcctcacatactc
aaacgcagtgacattttgcaagactttaaacctgaggagtcccagactacctccaaggaa
gtgaagaaaccccccgatgtggtgcgagaataccaaacgaaactagagtttgcactgaag
ttaggctattctgaagaacaggttcagcttgtgctcaataaactcggtaccgatgcttta
atcaatgacatcttgggagagctcgtcaagcttggaaacaaaagtgaggccgaacagacg
gttagtacggtcaacagtctaacgcgggaagcgccttccctggagtctcagcggtcggac
tctccgatgcaagagctcgtggcggatgacggggagaacctgagacccgtagtcatcgat
ggcagcaatgtggccatgagccatggaaacaaagaagtcttttcctgccggggaataaaa
ttggcagtggattggtttttggaaagaggccacaaagatattacagtttttgttcccgct
tggaggaaagagcagtcccgacctgatgctcttatcacagatcaagaaatcctgcgcaaa
ttagagaaggagaagatcctggtgttcacgccctccaggcgagtgcaggggaggcgagtg
gtgtgctatgatgacaggttcatcgtgaagctggctttcgagtcggacggggtcatcgtg
tccaatgacaactacagggacctggccaatgaaaaaccagagtggaagaaattcatcgat
gagcggttgttaatgtactcgtttgtcaatgacaagttcatgcctccagacgaccccctt
ggcagacacggcccaagcctcgataattttctgaggaagaaacctattgttcctgagcac
aaaaagcagccttgtccatatgggaagaagtgcacctatggccacaagtgcaaatactac
catcccgagaggggcagccagccgcagcggtcggtggctgacgaactccgggccatgtcc
agaaacacggcggccaaaacggcgaacgaaggcgggctggtgaaaagcaacagcgtcccc
tgcagcactaaagcggacagcgcctcggatgtcaaacgaggcgctcccaagaggcagtcg
gaccccagcatcaggactcaagtctaccaggacctcgaggaaaagctgcccaccaaaaac
aaattggaaaccaggtccgtcccctctttagttagtatcccggcgactgccaccgcaaaa
ccccaaagcgctacgtctttaagcaacggccttccatccggagttcacttcccacctcag
gatcaaagaccccaggggcagtatcctccgatgttgatggcaaccaaaaatcacggcacg
cccatgccttacgaacagtaccccaaatgcgactcgcctgtggacatcgggtattactcc
atgctgaacgcctactcgaacctgagcgtgtccggcccgcgcagccccgagcgccgtttc
tccttggacacggactacagggtgagctccgtggcttccgactgcagcagcgaagggagc
gtgagctgcgggagcggcgactcgtacgtgggctacggcgaccgcccgtacgtcagctct
cccgacccccagctggaggagagcctcaagtgtcagcacgtgcacccgcacagccgcctt
aattcccagcccttcctgcagaacttccacgagcccgtgacccgagtgcagagttacagt
cacgaagaaccaaagtaccaccccaaggcgcctctcccgcacctggccgtgcacctgcag
caccccgccgtgggggcccgggccagctgccccggcgactacccctcgccgcccggctcc
gcccactccaaggcgccgcacctggggcgcgccctggtggccacccggatcgacagcatc
tccgactcccggctctacgacggctctccctcccgccagcggaagccttactcgcacccg
gaggggccggggggctgggagcggcccggctacggggtggacgcgtacggctaccggcag
acttactccttgccggacagctccacgcagccctgctacgagcagttcaccttccagagc
ctccccgagcagcaggagcccgcctggcgcgtcccctactgcgggccgcccgcggagccc
cccaggtaccaggacagccgggagaaggtctacgtcaacctgtgcaacatcttcccgccc
gacctcgtgaggacggtcatgaaacggaaccctcacatgacagacgcccagcagctcgcc
gcagccattctggtggagaagtcccagctgggttattga
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