Lynx rufus (bobcat): 124505414
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Entry
124505414 CDS
T08475
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lruf03009
]
124505414
Enzymes [BR:
lruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124505414
Ribosome biogenesis [BR:
lruf03009
]
Eukaryotic type
90S particles
Helicases
124505414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
124505414
NCBI-ProteinID:
XP_046927317
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MGKTADCRGPEGRPDPVRSFNRWKKKHSHKQSQKKQLRKQLKKPEWQVERESISRLMQNY
EKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKT
LAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKD
LKHEAERINNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAII
ENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQK
ISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNE
FVRKKAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILL
PSEEKGMVQQLLQKKVPVKEIRINPEKLIDVQKKLESFLAQDQDLKERAQRCFVSYIRSV
YLMKDKEIFDVSKLPIPEYALSLGLAVAPRVRFLQKMQKQPPKELVVSQDHKQIEPRAPS
LTNDEVEEFRAYFNEKMSILQKGGKRPEETECTPGKGISDEEEEEKEDEEEMEEKLAKAK
ESPLQSVPSTGESKEAPGQFLDRDEDEDDGHDADFFTVKRHNVFGLDLKENKTPQKKEPS
KSSVKKKVTKVAEAKKVMKRNFKVNKKITFTEEGESVQQWPQMQKSVSKDAEEEEDSTGG
INLDKAKERLQEEDKFDKEEYRKKIRAKHREKRLKEREARREASKRQAKARDEEEAFLDW
SDDDDDDGFDPSTLPDPDKYRSSAESDSDDTENKISDTKKKQGMRKRNNSEVEDVGPTSR
NRKKAKWETLEPLDTGLSLAEDEELVLHLLKSQS
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaactgccgactgtcggggcccggaaggccggcccgacccggtgcggagcttc
aaccgttggaagaagaaacacagccacaagcagagccaaaagaagcagttgaggaagcag
ctgaagaagcccgagtggcaagtggagcgcgagagtatcagccgcctcatgcagaactac
gagaagataaatgtaaatgaaattacaagattttcagatttccctttgtccaaaaaaaca
ttaaaaggtttgcaagaagcccagtaccgtttggtaactgagatacagaagcagactatt
ggattggctttgcaagggaaagatgttcttggagctgccaagacaggatctggcaagact
ttggctttccttgttccagtgttggaagccttatatcgtttgcagtggacctcaacagac
gggctgggggttctgattatatcacccacaagagaactggcctatcagacttttgaggtt
ctccgaaaagtaggaaagaatcatgacttttcggctggtctcatcattggtggaaaggat
ctgaaacatgaagctgagaggatcaataacataaatatacttgtttgtactccgggtcgg
cttcttcaacacatggatgaaacaatatgttttcatgctaccaatctccaaatgttagtt
cttgatgaagcagatagaatcttggatatgggctttgctgataccatgaatgctattatt
gaaaatcttcccaagaaacgtcagactttgcttttctcagctacccaaaccaaatctgta
aaggaccttgcacgcttgagtttgaaaaaccctgagtatgtctgggttcatgaaaaagca
aaatacagcacccctgccactttggaacagaactacatagtttgcgagctgcagcaaaaa
ataagtgtgttgtattcctttttgagaagccacctgaagaagaaaagtattgtatttttc
tccagttgtaaagaggtccagtacctgtaccgggtgttctgtcggctacgtcctgggatc
tctatccttgcgctgcacggccggcagcagcagatgagaaggatggaggtctacaatgaa
ttcgtccgcaagaaggctgcagtcctctttgctactgacattgcagccagggggctggat
ttcccagctgtgaattgggttcttcagtttgattgtccagaggatgccaacacatacatt
caccgagcaggtagaactgccaggtacaaagaggatggtgaagctttattaattttactt
ccctcggaagaaaaagggatggtgcagcagcttctccagaagaaagtgcctgtgaaggaa
atcagaattaatccagaaaaacttatagacgtccagaaaaaattggaatcatttttagca
caagatcaagatttaaaagaaagagctcaaaggtgttttgtctcttatatacgctcagtg
tatctgatgaaggataaagaaatatttgatgtgagcaagttacctatacctgaatatgcc
ctatctcttggtcttgctgtggcacctcgggtaagatttcttcagaaaatgcagaaacaa
ccccccaaagaattggtggtgagccaagatcacaaacaaattgagccaagggctccctcc
ctcaccaatgatgaagtagaagaatttagagcctacttcaatgagaaaatgtccatcctt
cagaaaggtgggaaaagaccagaagagacagaatgcacaccgggtaaggggattagtgat
gaagaggaagaagagaaggaagatgaagaagaaatggaagagaaactggcaaaagcaaaa
gagtctccacttcagtctgtccctagcactggggagtccaaggaagcccctgggcagttc
ttagacagagatgaggacgaggacgatggacacgatgctgatttctttacagtgaagcgg
cacaatgtgtttgggttggaccttaaagagaataaaacaccacagaagaaagaaccttct
aaatccagtgtcaagaagaaagtgaccaaggtcgcagaagcaaaaaaagtaatgaagaga
aattttaaagtgaataagaagataacatttactgaggaaggggagtcggttcagcagtgg
cctcagatgcagaagtctgtctccaaggatgccgaagaggaggaggacagcactgggggc
atcaacttagataaagcaaaggaaaggcttcaagaagaggacaaatttgacaaagaagag
tataggaagaagatcagggcaaagcatcgggagaaaagactgaaggaaagggaagccaga
agagaagccagtaagagacaagcaaaggccagagatgaagaggaagcttttctggattgg
agtgatgatgatgatgatgatggatttgatccaagcacacttccagatccagataagtac
agaagctctgcagaatcggacagtgacgacacggagaataaaattagtgataccaagaag
aagcagggaatgaggaaaaggaacaacagcgaagtggaagacgtgggacccacgagtcgt
aacagaaagaaggccaagtgggagaccttagagcctttggacacaggcctgtctttagca
gaggatgaagagctggtgttacatctgctcaaaagtcaaagctag
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