Lynx rufus (bobcat): 124505520
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Entry
124505520 CDS
T08475
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM21-like
KO
K10651
tripartite motif-containing protein 21 [EC:
2.3.2.27
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09160 Human Diseases
09163 Immune disease
05322 Systemic lupus erythematosus
124505520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124505520
04131 Membrane trafficking [BR:
lruf04131
]
124505520
04121 Ubiquitin system [BR:
lruf04121
]
124505520
Enzymes [BR:
lruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124505520
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124505520
Membrane trafficking [BR:
lruf04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
124505520
Ubiquitin system [BR:
lruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124505520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
zf-RING_4
zf-rbx1
PanZ
Sina_RING
zf-Nse
RING_XB3-XBAT31
At2g31720-like
zf-C3HC4_5
Thioredoxin_6
Motif
Other DBs
NCBI-GeneID:
124505520
NCBI-ProteinID:
XP_046927439
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MASAARLAMMWEEVTCAICLDPVVEPVSIECGHSFCHDCISQVGKDGGGVCPVCQHIFLL
RNVRPNWPLANMVDNLKQIDQSAKEGMQRERCEVHGEKLHLFCEEDGKILCWVCSQSQNH
RNHHMVPIEEAAQEYKEKLQVALGNLRKGQRLAEELEVDIAMKRAAWKSQVETHKLRIHT
EFVQQQNFLAAEEQRQLQKLEMEEKEQLRILGEREATLVQKSQALQELIVELEKRSRGSA
LELLQEVKSVLGRSECWNLKNLDITPPDLRSVCLVPGLKRMLRTYGVHITLDPYTANPWL
ILSEDRRQVRLGGSRQEVPENEGRFDTYPMVLGAQFFDSGKVYWEVDVTGKEAWDLGVCR
DSVRRKGHFLLSPQNGFWTIWLWNKQKYEAGTSPQTPLHLRVPPCQVGIFLDYEASTVSF
YNITDHGSLIYTFSECAFAGPLRPFFSTGFNDEGSNSAPLVLRPLGVGW
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagcagcgcgcctggcgatgatgtgggaggaggtcacttgcgctatctgcctg
gatcctgtcgtggagcctgtgagcattgaatgtggccacagcttctgccacgactgcatc
tctcaggtgggaaaagatgggggcggcgtctgccctgtgtgtcagcacatcttcttgctc
cggaacgtcaggcccaactggccgctggccaacatggtggacaaccttaaacaaattgac
cagagtgccaaggagggcatgcagcgggagcggtgcgaggtgcacggagagaaactgcac
ctgttctgcgaggaagacgggaagatcctttgctgggtgtgttcccagtcccagaaccac
cgtaaccaccacatggtcccgattgaggaggctgctcaggagtacaaggagaagctccag
gtggcattagggaacctgagaaaaggacaacggttggcggaggagttggaagtggatatt
gcaatgaagagagcagcctggaagagtcaggttgagacacacaaactgcggattcacaca
gagtttgtgcagcagcagaacttcctggctgcagaggaacagagacagctacagaagcta
gagatggaggagaaggagcagctgagaatcctgggcgagagggaggccacactggtccag
aagagccaggccctgcaggagctgatcgtggagctggagaagaggagcaggggctcagcc
ctggagctgctgcaggaggtgaaaagtgtcctgggaaggagtgagtgttggaacctgaag
aatctggacatcacccctccagacctgaggagtgtgtgcctcgtgccaggactgaaaagg
atgctgaggacttacggagtacacatcactctggatccgtacacagccaatccgtggctc
atcctgtcagaggatcggagacaagtgaggcttggaggcagccggcaggaagtgcctgaa
aatgagggcagatttgacacttatcccatggtcctgggtgcccagttctttgactctgga
aaggtttactgggaggtagatgtgacaggaaaggaggcctgggacctgggtgtttgtaga
gactctgtgcggaggaaagggcattttttgctcagcccccaaaatggcttctggacaatt
tggctgtggaacaaacaaaaatatgaggctggcaccagcccccagactcccctccacctt
cgggtgcctccgtgccaagttgggatcttccttgactatgaggccagcactgtctccttc
tacaacatcactgaccacggctccctcatctacactttctccgaatgtgccttcgctgga
cctctgcggcccttcttcagtactggttttaatgatgaaggaagtaactcagcccctctt
gtcctccgtccattgggggtgggttggtag
DBGET
integrated database retrieval system
