Lynx rufus (bobcat): 124505674
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Entry
124505674 CDS
T08475
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lruf04040
]
124505674
Ion channels [BR:
lruf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124505674
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
YVC1_C
Motif
Other DBs
NCBI-GeneID:
124505674
NCBI-ProteinID:
XP_046927636
LinkDB
All DBs
Position
Unknown
AA seq
1258 aa
AA seq
DB search
MAPVKISHIVSFSSQDPKYPVENLLTPDCQKGPWLSCPQDKSGQLKVELQLERAVPIGYI
DVGNCGCAFLQIDVGRSSWSLDRPFVTLLPATMLMSLADSKQGKNRSGVRMFKDEDFLAA
ASGEPWDRLRLTCSQPFTRQQSFGLAFLRVCSSLDSSDDPVGDLSAPGSTRLSQGSDAQE
SGPSPWLANPSIRRTFFPDPQTSTKEISELRNILKQLQPGALGRSACMVLSAARRVPPVS
MASTKNIQAEPGPSHPASTELRPEEQNSENNVGRTKRRKVQAHRPLSSSNSRPNRRGIAK
AGQREHQRPQAQSSGVQDSALCPICSGSFSIKVLPWHAATCGETSPPHPASPSSSPSSSQ
SVLRIECFLSLTPIPLVSRPQPNWTEIVNKKLKFPPPLLTAIQEGRLGLVQHLLESGVEA
SGSGPGGPLRNVEEAEDRSWREALNLAIRLGHEAITDVLLANVKFDFRQIHEALLVAVDT
NQPAVVRRLLARLEREKGRKVDTRSFSLAFFDSSIDGSRFAPGVTPLTLACQKDLYEIAQ
LLMDQGHTIARPHPVSCACLECSNARRYDLLKFSLSRINTYRGIASRAHLSLASEDAMLA
AFQLSRELRRLARKEPEFKPEYIALESLSQDYGFELLGMCRNQSEVTAVLNDLGQDNETE
PEAEGLGQAFEEGIPNLARLRLAVNYNQKRFVAHPICQQVLSSIWCGNLAGWRGSTTIWK
LFVAFLIFLTMPFLCLGYWLAPKSRLGRLLKIPVLKFLLHSASYLWFLIFLLGESLAMET
QLSTFRGRSQSVWETSLHMVWVTGFLWFECKEVWIEGLRSYLLDWWNFLDVVILSLYLAA
FALRLLLAGLAHVHCRDAPNGAACHYFTTAERSEWRTEDPQFLAEVLFAITSMLSFTRLA
YILPAHESLGTLQISIGRMIDDMIRFMFILMIILTAFLCGLNNIYVPYQETERLGNFNET
FQFLFWTMFGMEEHSVVDMPQFLVPEFVGRALYGIFTIVMVIVLLNMLIAMITNSFQKIE
DDADVEWKFARSKLYLSYFREGLTLPVPFNILPSPKALFYLLRRIFRFICCCCSCCKTKK
PDYPPIPTFANPGAGAGPGEGERGSYRLRVIKALVQRYIETARREFEETRRKDLGNRLTE
LTKTVSRLQSEVAGVRRTLEEGGTPRPPGGASVLSRYITRLRNSFQNLGPPIPETPELTV
PGLVGTQVSSETGLQDAGGARTPASGESGPSSPAHVLVHREQESEAAGDLPQEEDLGI
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtaaagattagccacatcgtatcattttcctctcaggatcccaagtatcct
gtggagaacttgctgactccagactgtcagaagggaccttggctcagctgccctcaggac
aagagtgggcagctgaaagtggaactccagctggagagggcagtgcccattggctacatt
gatgtaggtaactgtggctgtgctttcctgcaaattgatgtgggccgttcttcctggtcc
ctggacagaccttttgtcaccttgctccctgcaaccatgcttatgtccctggctgattca
aagcaggggaaaaaccgctcaggggtccgcatgtttaaagatgaagatttcctggctgcg
gcctcaggtgagccctgggatcgacttcgcctgacctgctcccaacccttcacacgtcag
cagtcttttggtctggccttcctccgggtgtgttcctccctggactcctcagatgaccct
gtgggggatctctctgctcccgggagcactaggctaagccagggttctgatgctcaggag
tctggtccaagcccctggctggctaatccttccattcggaggacgttcttcccagatccc
caaacgagcaccaaggaaatttcagagcttaggaatatcctaaagcagctgcagccaggg
gctttgggacgttcagcctgcatggtactttcagctgcccgcagggtgccccccgtgagt
atggcaagcacaaaaaacatccaggcagaaccaggtcccagtcatccagccagcacagag
ctcagaccagaagagcaaaactcagagaataatgtgggcaggacgaagagacggaaagtg
caagctcacaggcctttatccagttcgaactctcggccaaaccggagggggatagcaaag
gcagggcagagagaacaccagcgaccccaggcccaaagcagtggggtccaggatagtgcg
ctgtgccccatctgctcaggctccttcagcatcaaggttcttccctggcatgctgcgact
tgtggagagacctccccacctcacccagcctctccctcctcatcaccatcttcatcacag
tctgtactgagaattgagtgctttttgagcttaactcccattcctctggtctccaggcca
cagcccaactggacggagattgtgaacaaaaagctaaagttcccacctccgctcctgact
gccatccaggagggccgcctgggcctagtgcagcacctgctggagtccggggtggaggct
tcaggcagtgggccaggcgggcccctgaggaacgtggaagaggccgaggaccgctcctgg
agggaagctctcaatctggccatccggctgggccacgaggccatcaccgatgtgctgttg
gccaatgtcaagtttgacttccggcagatccatgaggcactgctagtggcagtggacaca
aaccagccagcagtggtgcgtcgcctgctggcccggctggaacgggagaagggccgcaaa
gtggacactaggtctttctcactggctttctttgactcctcaattgatggctcacgcttt
gcccctggtgtcactccactcaccctggcctgccagaaggatctgtatgagatcgcacag
ttgctcatggaccagggccacaccattgcccggccccacccggtctcctgtgcctgcctc
gagtgcagcaatgcccgccgctacgacctgctgaagttctccctgtcccgcatcaacacc
taccgcggcattgccagcagggcccacctctcgctggccagtgaggatgccatgctggct
gccttccagctcagccgggagctcaggcgccttgcacgcaaggaacctgagtttaagcct
gagtacattgccctggagtcactgagccaggactatggctttgaattgctgggcatgtgc
cggaaccagagtgaggtcaccgcagtactcaatgacctgggccaagacaacgagactgaa
cccgaggctgagggcctgggccaggcctttgaggaaggcatccccaacctggcgaggctg
agactggccgtcaactacaaccagaagcggtttgtagcacaccccatctgccagcaagtc
ctgtcttccatctggtgtgggaacctggctggctggcgtggaagcaccaccatctggaag
ctctttgtcgccttcctgatcttcctcaccatgcccttcctctgcctcggctactggctg
gcacccaagtcccggctgggccgtctgctgaagatcccagtgctgaagttcttgctgcac
tctgcctcctatctgtggttcctcatcttcctgctgggtgagtccctggccatggagaca
cagctgagcaccttccgcggccgcagccagagcgtctgggagacttccctacacatggtt
tgggtcacaggctttctgtggtttgagtgcaaggaagtgtggattgagggcctgcgcagt
tacctcctggactggtggaacttcttggatgtggtcatcctgtccctgtacctggcggcc
tttgcgctgcgcctccttctggctgggcttgcccacgtgcactgccgggatgcccccaac
ggggctgcctgccactatttcaccacggctgagcgaagtgagtggcgcactgaggacccc
cagttcctggcagaggtgttgtttgccatcaccagcatgctcagtttcacccgcctggcc
tacatcctgccagcccatgagtccctgggcactctgcagatttctattggcaggatgatt
gacgacatgatccggtttatgttcatcctcatgatcatcctgactgccttcctctgtggc
ctcaacaacatctacgtgccctaccaggagacagagcgtctgggcaatttcaacgagaca
ttccagtttctgttctggaccatgtttggcatggaggagcacagcgttgtagacatgcct
cagtttctggtgcctgaattcgtgggccgggccctctacggcatctttaccatcgtcatg
gtcattgtgctgctcaacatgctcattgccatgattaccaactccttccagaagattgag
gacgacgccgatgtggagtggaagtttgctcgctccaagctctacctgtcctacttccgg
gaaggcctgacgctgcctgtgcccttcaacatcctgccctcccccaaggccctcttctac
cttctcaggagaatattccgcttcatctgctgttgctgttcctgctgtaaaaccaagaag
ccagactacccgccaatccccacttttgccaatcctggggcaggggcagggcctggggag
ggagaacgtggatcctaccgcctccgagtcatcaaggccctggtacagcgctacatagag
acagcccggcgggagtttgaggagacccgtcggaaagacctgggcaacagactgacagag
ctgaccaagactgtgtctcgactgcaaagtgaggtggctggtgtgcggcggactctggaa
gagggagggacaccccgaccacccggaggtgccagcgtcctcagtcgctacatcacccga
ctgcgcaacagcttccagaatctgggccccccaatccctgaaaccccagagctgacagtg
ccagggcttgtggggacccaggtatcttcggaaactgggcttcaggatgctggaggggct
aggactccagcttctggagagtctggcccttcctccccagctcacgtgttagtgcacagg
gagcaagaatcagaggcggctggggacctgccccaggaggaagatttgggaatctaa
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