Lynx rufus (bobcat): 124506320
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Entry
124506320 CDS
T08475
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04068
FoxO signaling pathway
lruf05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
124506320
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
124506320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lruf04121
]
124506320
Enzymes [BR:
lruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124506320
Ubiquitin system [BR:
lruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124506320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
124506320
NCBI-ProteinID:
XP_046928321
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MAVSLPPALGLSSAPDEIQHPHMKFSEWKFKLFRVRSFEKAPEEAQIEKKISSEGKPSLE
QSPAILDEADGQKPALSQPALKAHPTFSKKSHDDGKAGDKAIHQANLRHLCRICGNSFKT
HGHNRSYPVHGPVDGKTQVLLRKKEKRATSWPDLIAKVFRIDVKADVDSIHPTEFCHSCW
NIMYRKFSSAPCEVNFPRNAPMEWHPHTPSCDICRAARRGLKRKSHQPNVQLSKKLKTVV
DRARRARRHKKRARARISSKEVMKKISKCSDIHLSTKLLAVDFPAHFVKSISCQICEHIL
ADPVETSCKHVFCRICILRCLKVMGSYCPCCQYPCFPTDLESPVKSFVSILNSLMVRCPA
KECNEEVSLEKYNHHVSSHKESKETFVHINKGGRPRQHLLSLTRRAQKHRLRELKLQVKA
FADKEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYYPFEWQPPLKNVSSSTDVGIIDG
LSGLSSSVDDYPVDTIAKRFRYDSALVSALMDMEEDILEGMRAQDLDDYLNGPFTVVVKE
SCDGMGDVSEKHGSGPAVPEKAVRFSFTVMKITVAHGSENVKVFEEVKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKASNLVLEMGGILRTFKFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVFHSITRSHSENLERYEVWRSNPYHESVEELRDRVK
GVSSKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPNASKEERKRWQATLDKHL
RKKMNLKPIMRMNGNFARRLMTKETVEAVCELIPSEERHEALRELMDLYLKMKPVWRSTC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNAYRNSGFTLN
SQSGVGDPIGLEDSLETQDSMDF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctctttgccacccgccctgggactcagttccgccccagatgaaattcagcac
ccgcatatgaaattttcagaatggaaatttaagctcttcagggtgagatcttttgaaaag
gcacctgaagaagctcaaatagaaaagaaaatttcctccgaggggaaaccctctctggag
caatctccagcaatcctggatgaggctgatggtcagaagccagccctgagtcaaccggca
ttaaaagctcaccctacgttttcaaagaaatcccatgatgatgggaaagcaggagacaaa
gcaatccaccaagccaaccttcgccatctctgccgtatctgtgggaattcttttaaaact
catgggcacaataggagctatccagtccatgggccagtggatggtaaaacccaagtcctt
ttacgaaagaaggaaaagagagccacttcctggccagacctcattgccaaggttttccgg
attgatgtgaaagcagacgttgactcgatccaccccactgaattctgccacagctgctgg
aacatcatgtacaggaagtttagcagtgccccgtgtgaagtcaacttcccaaggaatgca
cccatggagtggcatccccacacgccatcctgtgacatctgccgcgctgcccgccgggga
ctcaaaaggaagagccatcagccaaacgtgcagctcagcaaaaaactcaaaaccgtggtt
gaccgagcgagaagagcccgtcggcacaagaaaagagctcgggcaaggatcagcagcaag
gaagtgatgaagaagatctccaagtgcagtgacattcatcttagtaccaagcttcttgcg
gtggacttcccggcacactttgtgaaatctatctcctgccagatttgtgaacacatcctg
gctgaccccgtggagaccagctgtaagcacgtattttgcaggatttgcattctcaggtgc
ctcaaagtcatgggcagctattgtccctgttgccaatatccctgcttccctaccgacctg
gagagtccagtgaagtcctttgtgagcatcttgaactccctgatggtgagatgtccagca
aaagagtgcaatgaagaggtcagcttggaaaaatataaccatcatgtctcaagccacaag
gagtcaaaagagacttttgtgcatattaataaagggggtcggccccgccagcatctcctg
tctttgacgcgaagggctcagaagcatcgcctgagggagctcaagctgcaagtgaaggct
ttcgccgacaaggaagaaggtggagatgtgaagtctgtgtgtctgaccttgttcctgctg
gcactgagggcgaggaatgagcacagacaagccgacgagctggaggccatcatgcaggga
cggggctctggcctgcagccagctgtgtgcttggccatccgtgtcaacaccttcctcagc
tgcagtcagtaccacaagatgtacaggactgtgaaagccatcacggggaggcagattttt
cagcctttgcacgcccttcggaatgctgagaaggtcctcctgccaggctactaccccttt
gagtggcagccacctctgaagaacgtgtcttccagcactgacgtcggcattattgatggc
ctgtctggactgtcctcctctgtggacgattacccggtggacaccattgccaagcggttc
cgctacgactcggctttggtgtctgctttgatggacatggaagaagatatcctggaaggc
atgagagcccaagacctggatgactacctgaatggccccttcaccgtcgtggtgaaggag
tcttgtgacggcatgggagatgtgagtgagaagcatgggagtgggccagcagttccagaa
aaggcggttcgcttttcgttcacagtcatgaagattaccgtagcacacggctcagaaaac
gtgaaggtatttgaggaggtcaaacctaactctgaactgtgttgcaagcccttgtgcctc
atgctggcagacgagtctgaccacgagacgctgacggccatcttgagccctctcattgcc
gagagggaggccatgaaggccagcaacttagtgctggagatgggaggcatccttcggact
ttcaagttcatcttcaggggcactgggtacgatgagaagcttgtccgggaagttgaaggc
ctcgaggcttctggctcagtctacatttgtaccctttgtgatgccacccgcctggaggcc
tctcaaaatcttgtcttccactccataaccagaagccactctgagaacctggagcgctac
gaagtctggcgttccaacccgtaccacgagtctgtggaagaactgcgggatcgcgtgaaa
ggagtctcatcgaaacctttcattgagaccgtcccttccatagatgcactccactgtgac
attggcaatgcggctgagttctacaagattttccagctagagataggggaggtgtacaag
aatcccaatgcctccaaagaggaaaggaaaaggtggcaggctacgctggacaagcatctc
cggaagaagatgaacctgaagccaatcatgaggatgaatggcaactttgccaggaggctc
atgaccaaagaaacagttgaagcagtctgtgaattaatcccctccgaggaaaggcatgaa
gctctcagggagctgatggacctttacctgaagatgaaacccgtgtggcgatcgacatgt
cctgctaaagagtgcccagaatccctctgccagtatagtttcaattcacagcgttttgct
gagctcctctctaccaagttcaagtatagatatgagggcaaaatcaccaattactttcac
aaaaccttggcacatgtgcctgaaattattgagagagacggctccattggggcatgggca
agcgagggaaatgaatctggcaacaaactgttcaggcgcttccgaaaaatgaatgccaga
cagtccaagtgctatgagatggaagatgtcttgaaacatcactggttgtatacctccaaa
tatctgcagaagtttatgaacgctcataacgcgtatagaaactctgggtttaccttaaac
tcgcagtcaggcgtgggggacccaataggcctagaggactctctggaaactcaagattcg
atggatttttaa
DBGET
integrated database retrieval system
