Lynx rufus (bobcat): 124506843
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Entry
124506843 CDS
T08475
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
124506843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lruf03036
]
124506843
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
124506843
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_KDM3B
JmjC
C1_2
Dicers_N
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
124506843
NCBI-ProteinID:
XP_046928790
LinkDB
All DBs
Position
Unknown
AA seq
2362 aa
AA seq
DB search
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRASQNSNAVHGHYTRAQANSPRPAMNSQAAVPKQNTHQ
QQQQRNIRPSKRKGSDSSIPDEEKMKEEKYEYIARGENAKGKNKQLMNKRRKPEEDEKKL
NMKRLRTDNVSDFSESSDSENSNKRIINNSSEQKPENELKNKNTSKVNGEEGKSQNNEKV
GEETLIIDSQPPWDQIQEDKKHEEAEKQKSVDTQLQDKMIIRSSEQATLSDHNPNDLLLQ
ECNMEKTHTVESLPKEKFVSRPPTPKCVIDITNDTNSEKVAQETSSTFGLQTLQKMDPNV
SDSKHSIANAKYLETAKQDSDQSWVSDVVKVDLTQSNVRSASSGNDHLNMEKEKNQYVSY
MSSLSAVSVTEDKLHKRSPPPETVKSKLNTSVDIHKTKSNPSPEVLKPKITHSPDSVKSK
ANYVNSQAAGERRLANKIEHELSRCNFHSVPTRGSTLEATKSPLIIDKNEHFTVYRDPAL
VGSETGTNHISPFLNQHPFPLHSSSHRTCLNPGTHHPALTPAPHLLAGSSSQTPIPTINT
HPLTSGPHHSVHHPHLLPTVLPGVPAASLLGGHPRLETAHASSLSHLALAHQQQQQLLQH
QSPHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPENAVNAESSLRRN
SPSPWLHQPTPVTSADGVGLLSHIPVRPSSAEPHRSLKITAHSSPPLTKSLIDHHKEELE
RKAFIEPLRSVASTSAKNDLDLNRSQTGKDGLLHRHFVDPVLNQLQRQPQETGERLHKYK
EEHRRILQESIDVAPFTTKIKGLEGERDSYSRVALSSSSPKSHVIVKQDKDVECSVSDLY
KMKHSVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSHIYTEKQSNTLAATANPQTLTSF
ISSLSKPPPLIKHQPESEGLVGKIPEHLPHQIASHSVTTFRNDCRSPTHLTVSSTNALRS
MPALHRAPVFHPPIHHSLERKESNYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPEPKD
SQANFKSSSEQSLSEMWKSNNNLSKEKAEWHVEKSSGKSQAAMASVIVRPPSSTKLESVP
AMQLASKDRVSERSSTGANQTDCLKPAEAGETGRIILPSVNSDSAHIKSEKNVQAVSQGS
VPSSVMSAVNTVCNTKTDVFTSAATTTSVSSWGGSEIIYSLSNTILASKSLECTSSKSVS
HSVAQIQECRVSTTAPVTPASSKTGSAVQPSSGFSGTTDFIHLKKHKAALAAAQYKSSNV
SETEPNAVKNQTSSASLLSDSTVACSTINKANSVGNGQASQTSQPNYHTKLKKAWLTRHS
EEDKNTNKMENSGNSVSEIIKPCSVNLIASTSNDIQNSVDSKMIVDKYIKDDKVTRRKAK
RTYESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEIEEDLKPNGVLSRSAK
EKSKLKLQSNSNSAGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIR
SKKGEEPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYEDDELD
VETSKYILDIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHW
VCQKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLD
VMHTLREKYGLKSHCHCTNKQNIQVGNFPAVNGVSQVLQNVLNHSNKISLCMPESQQQNN
PQKSESNGNSSPGSDVSTDSKLTPPESQSPLHWLADLAEQKSREEKKENKEFALENQIKE
EREHDNPDSPNSRTSPPVSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGTPS
GKSGRTMPNILDDIIASVVENKIPPNKASKINVKPELKEEPKECRNSSTEENSMLYDDVP
HSWICEKHILWLQDYKNINNWKLFRECWKHGQPAVVSGVHKKMNISLWKAESISLDFGDH
QADLLNCKDSIISNANVKEFWDGFEEVSKRQKMKSGETVVLKLKDCPSGEDFKTMMPARY
EDLLKSLPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHVE
VSDVVNILVYVGIAKGNGILSKAGVLKKFEEEDLDDVLRKRLKDSSEIPGALWHIYAGKD
IDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNRKLRQRLLEEYGVRTCTLIQFLGDAI
VLPAGALHQVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKNILYH
AVKEMVRALKIHEDEVEDMEEN
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtccttattccttaaatggatacagagtgagagtatatagacaagactctgcc
acccagtggtttactggcataattactcatcatgatctcttcactcgcaccatgatcgtt
atgaatgatcaggtactagaaccacagaatgtcgatccttctatggttcaaatgaccttt
ctagatgatgttgttcactctttgttaaaaggtgaaaatattggcatcacatcacggcga
aggtctcgcgccagtcaaaatagcaacgctgttcacggtcattatacacgtgcccaagca
aatagtcccagaccagcaatgaactcccaagctgctgtaccaaaacagaatacacaccag
caacagcaacaaagaaatattcgtccaagtaagaggaagggctcagatagcagtatacca
gatgaagagaagatgaaggaggaaaagtatgagtatatagcacgaggagaaaatgctaaa
gggaaaaacaaacagttgatgaataaaagaaggaaacctgaggaagatgaaaagaaacta
aatatgaaaagactacgaaccgacaatgtttcagacttttctgagagcagtgactcagaa
aattcaaataagagaataataaataattcctcagagcagaagccagagaatgagttgaaa
aataaaaacacttcaaaggtaaatggagaagaaggaaaatcccagaataatgagaaggta
ggagaagagacactaataatagacagccagcctccctgggatcaaatacaggaagataaa
aaacatgaagaagcagagaagcagaagtctgttgacactcagcttcaagacaaaatgatt
attcgttcatcagagcaggccacactttctgatcataatcctaacgatttacttcttcaa
gaatgcaatatggaaaaaacacatacagtggaatcattaccaaaggagaaatttgtgtcc
agaccacccacaccaaaatgtgttattgatattacgaatgacactaattcagaaaaggtg
gctcaggaaacctccagtacctttggccttcagacacttcagaaaatggatcctaatgtt
agtgattcaaaacattctattgcaaatgcaaaatacttggaaacagcaaaacaagattcc
gaccagagctgggtcagtgatgtagttaaagtagatttaacccaatcaaatgttaggagt
gcttcctcaggaaatgatcacctgaatatggaaaaagagaaaaaccagtatgtctcttat
atgtcttctctgagtgcagtttctgtcacagaagataagctgcataagcgaagcccaccc
ccagagacagtaaaatctaaacttaatacttcagtagatattcacaagacaaagtcaaat
ccctcacctgaagttcttaaacctaaaattacccattctcctgattctgtaaagtctaag
gccaattatgtgaacagccaagctgctggtgagagaagactggcaaacaagatagaacat
gagttatcaagatgcaattttcattcagttcctactcgaggcagtaccttagaagctaca
aagagccctcttatcattgataaaaatgagcatttcacagtttacagagatcctgcactt
gttgggtcagaaacaggaactaatcacatttcacctttcttaaaccagcatccctttcct
cttcattcttcatcccatagaacctgtttaaatccaggtacccatcaccctgccttaact
cctgcacctcacttacttgcgggatcatctagtcaaactccaatacctaccattaacact
caccctctgactagtggtccacaccattctgttcatcaccctcatttacttcctactgtg
ttacctggagtgcctgctgcctccttacttggtggccacccacgactagagactgctcac
gccagcagcttgagccacttagcattagcacaccagcaacagcaacagttattacagcat
cagtcccctcatcttcttggacaagcccatccttctgcttcatataatcagcttggactt
tatccaattatttggcaatatccaaatggaacacatgcatactcaggacttggtctacct
tcttctaagtgggttcacccagaaaatgcagttaatgctgaatcttctttaaggaggaat
tctcccagtccctggttacatcagcccacccctgtgacctcagcagatggtgttggatta
cttagtcacattcctgtcagaccttccagtgcagagcctcatcggtctcttaaaattaca
gcacattccagtccaccattgacaaaaagtttaatagatcaccataaagaagaactggag
aggaaagctttcattgaaccattacgttctgttgcatccacatcagcaaaaaatgaccta
gatctgaataggtcacagactggaaaagatggtctattgcatagacattttgtggatcct
gtattgaatcaattacagagacaaccccaggagactggagagagattacacaaatataag
gaggaacaccgtcgaatccttcaagaaagtattgatgttgctccctttacaactaaaatc
aaggggcttgagggtgagagagatagttattccagagtagcattgtcatcttctagccct
aaaagccatgtcattgtcaaacaagacaaggatgtagaatgttcagtatccgatctttat
aaaatgaagcactcagtgcctcagagtttgccccaaagtaactatttcactacattgtct
aatagtgtggtcaatgaaccaccaaggtcctatccatccaaagaggtttcacatatttac
actgaaaaacagagtaatacccttgctgcaacagctaatcctcaaactctgacttcattt
atatcatctctttcaaagcctccacccttaattaaacaccaaccagaaagtgaaggttta
gttggcaagataccagaacatcttccccatcaaattgcttctcactcggtaacaaccttc
agaaatgattgtaggagtcctacccatttgacagtttcttctacaaatgcactccggagc
atgcctgctttacatagagcaccagtatttcacccaccaatccatcacagcctggaaaga
aaggaaagcaactatagtagtctttcccctccaactttaaccccagtgatgcctgtaaat
gctggtgggaaagttcaagaatcacaaaagcctccaactctaattccagagccaaaagac
tctcaggccaattttaagagttcttctgaacagagtttgtcagaaatgtggaaatctaat
aataacctcagcaaagagaaagctgaatggcatgtggagaaaagcagtggaaagtcacag
gctgctatggcatctgtcattgttcgtccaccatctagtacaaaacttgagagtgtgcca
gcaatgcagttagcttccaaagatcgagttagtgagagatcttcaactggggcaaatcaa
acagattgtctcaaaccagcagaagctggggagactggaagaatcattctgccaagtgtg
aattcagacagtgctcacataaaatctgaaaaaaatgtccaggctgtctcacagggcagt
gttcccagttcagtcatgtctgccgtaaatacagtgtgtaataccaaaacggatgtattc
acatctgctgccactaccaccagtgtttccagctgggggggttcagaaataatttactct
ttatcgaataccattttggcctctaaatccttagaatgtacctcttcaaaaagtgtcagt
cattcagtggctcagatacaagaatgcagggtcagcaccacagctccagttacaccagcc
agtagtaagacaggaagtgctgttcagcccagctctgggttctcaggcacaactgatttt
atccatttaaaaaagcacaaggcagcattggctgcagctcagtataaaagtagtaatgtc
agtgagactgagcctaatgctgtgaaaaatcagacatcttcagcctcccttctctcggat
agcactgtagcctgtagtacaataaacaaagcaaactctgtaggaaatgggcaagcatcc
cagacaagtcaacctaactaccatactaaactgaaaaaggcctggcttactagacactca
gaggaagataaaaatactaataaaatggaaaattcagggaattctgtatcagaaattatc
aagccatgttctgtcaatttaatagcctctacatctaacgacatacaaaatagtgtagat
agtaagatgatagttgataaatacataaaagatgataaagtcactaggagaaaagccaaa
agaacttacgaatctggctctgaaagtggagactcagatgaaagtgaaagcaagtcagag
caaaggactaagaggcaacctaagccaacttacaaaaagaagcaaaatgacttgcagaag
agaaaaggtgaaatagaagaagatttaaaacccaatggggttctcagcaggagtgccaaa
gaaaaaagtaaattgaaattgcagagcaacagtaatagtgctggcatccctcgttcggta
ttaaaagattggcgtaaagtcaagaagctgaagcaaactggggaatcctttttacaggat
gactcctgctgtgagatagggcctaatttgcaaaagtgccgagaatgtagacttattcgg
agtaaaaaaggagaagaaccaacccactccccggtgttttgtagattttactactttaga
cgattgtcatttagtaaaaatggagtggttagaatagatggtttctcttctcctgaccaa
tatgacgatgaagctatgagcttatggacacatgaaaattatgaagatgatgaactagac
gtagaaacttcaaaatacatcttggatataataggtgataagttctgtcagttagtaaca
tctgaaaaaacagctttgtcctgggtgaaaaaggatgccaaaatcgcctggaaaagagca
gtgagaggagtccgggaaatgtgtgatgcatgtgaagcaacattgtttaacattcattgg
gtctgccagaaatgtggatttgtggtctgcttagattgctacaaggcaaaggaaaggaag
agttctagagataaagaactgtatgcttggatgaagtgtgtgaagggacagcctcatgat
cacaaacatttaatgccaactcaaattatacccggttctgttttgacagatcttctagat
gtgatgcacactcttagagaaaaatatggtcttaaatcccattgtcattgtactaacaaa
cagaatatacaggttggaaattttcctgcagtgaatggtgtatctcaagttttacagaat
gttcttaatcacagtaataaaatttctctgtgcatgcctgagtctcagcagcagaataac
cctcagaagtctgagagtaatggcaacagcagcccagggagtgacgtaagcacagacagc
aagttaactcctccagaatcccagtcaccactgcactggttagcagatcttgcagagcaa
aagtccagagaggaaaaaaaagaaaacaaagaatttgcccttgaaaatcaaattaaagaa
gagagagaacacgacaatcctgattctccaaatagcagaacatcacctcctgtgtcccag
aataatgaacaaggctcaaccttacgagatttactgaccacaacagctggcaagctccgt
gtgggttctacagatgctggcattgcctttgccccagtgtattcgatgggaaccccaagt
ggtaaaagtggaagaactatgccaaacattcttgatgacataattgcttcagttgttgaa
aacaaaattccaccaaataaagcctctaagataaatgtaaaaccagagctgaaagaagag
cctaaagagtgcagaaattcgtccacggaggaaaacagtatgttgtacgatgatgtgcca
cattcttggatctgcgagaagcatattctgtggcttcaggattataaaaatattaataat
tggaagcttttcagagagtgttggaaacatggacaacctgcagtggtttctggtgtgcat
aagaaaatgaacattagcttgtggaaggcggagtcaattagtcttgattttggagaccac
caagctgatctcttgaactgcaaagacagcattatttcaaatgccaatgttaaggaattc
tgggatggttttgaagaagtttcaaaacggcaaaaaatgaaaagtggagaaacagttgtt
ttaaaattgaaagattgcccttcaggagaagacttcaagactatgatgccagcaaggtat
gaagatcttttaaaaagcctgccattgccagaatattgtaatccagaaggaaaattcaac
ttggcctctcatttgccaggattttttgtgcgccctgatctgggacccaggttgtgcagt
gcctatggtgtagctgctgctaaagatcatgacataggaacaacaaatctccatgttgaa
gtctctgatgttgtaaacattctagtctatgttggcatagcaaaaggaaatggcattctt
tcaaaagcaggagtactcaagaaatttgaggaagaagatttggatgatgttttaagaaaa
cgattgaaggactcaagtgagatacctggtgctctgtggcatatttatgcagggaaagac
attgacaagataagggaatttcttcaaaagatttcaaaagaacaaggccttgaagttcta
ccagaacatgatccaatacgtgaccaaagctggtatgtgaacagaaagctccgccaaaga
ctgcttgaggaatatggagtcagaacttgcactctcattcagttcctcggtgatgccatt
gtcttaccagcaggagcacttcatcaggtacagaattttcacagctgtattcaggtaact
gaagactttgtgtctccagaacatcttgtacagtcatttcatttaacacaggaactgaga
cttttgaaggaggaaatcaattacgatgataaactacaggttaaaaatatattgtatcat
gcagttaaggaaatggtgagagctttgaagatacatgaagacgaagtagaggatatggaa
gaaaattag
DBGET
integrated database retrieval system
