Lynx rufus (bobcat): 124506957
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Entry
124506957 CDS
T08475
Name
(RefSeq) DNA excision repair protein ERCC-6-like isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
124506957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lruf03036
]
124506957
03400 DNA repair and recombination proteins [BR:
lruf03400
]
124506957
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
124506957
DNA repair and recombination proteins [BR:
lruf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
124506957
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
124506957
NCBI-ProteinID:
XP_046929054
LinkDB
All DBs
Position
Unknown
AA seq
1484 aa
AA seq
DB search
MQNARIPHSSQAQEQDCLQSQCVSDKQEMTIKREDDGNAEVEENLPSCSSASGPSTSAEG
CSSEVLRRGPALLHINRHQIQTVELSAQALELQGLGVDVYDQDVLEQGVLRQVDSAIHEA
SRAAQLADAEKEYRSVLDDLTSCRTSLRQINKIIEQLSPQAATNRDVNRKLDSVKRQKYN
KEQQLKKITAKQKRLQAILGGAEVQVEIDHAGLEEEDTEPGPSCLGSMLMPVQEAAWEEL
IRTGQMTPFGTQIPQKQEKKPRKLMLDEASGFEKYLADQAKLSFERKKQACNKRAARKTA
ASGTSELSATLSENKPSERSKVLSKADKRLRKHIKKLQKRALHFQGKVGLPKGKKPLESD
VRPKAEGTSESEESEYFPTEEEQEEAEGAELTGEGPDSLLKPVLKHRKRQKKVTVQEMGD
DFFPSSGEEAEATCGGGGRKVVRCRDDGDEDYYKQRLRRWNKLRLRDKEKCLKLEGDSEE
SDAEFDDFKIPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGL
SYSKIRTRGSNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEK
LIRDIAHCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPH
RIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYK
CACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQLKVYQNFIDSKEVYRIL
NGDMQIFSGLVALRKICNHPDLFSGGPKNLRGIPDEELEEDQFGYWKRSGKMIVVESLLK
IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIFV
FLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIE
EKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPDASQSTETSAIFAGTGSDV
QTPKRLLKRKLLPAFGTDPNVSICKKCPDSNASANDATSSEEKSTATGAEVNAVTSDQVT
SDPLKDAPRTPRDLTGGDGPGEEVSAVSRPEESSVISGHGECSDSPGISKMDGLSSEESI
HEKQGLSDKRESCQAATDPLRENKQTENNFYKHKSKTKHSAPEEETLEHHRRLKQKPKNS
KHRRDAKFEGTRIPHLVKKRRYQKQDSENENETSQQSNDDYVLEKLFKKSVGVHSVMKHD
AIIDGANPDYVLVEAEANRVAQDALKALRLSRQRCLGAVSGVPTWTGHRGVSGAPAGIKS
RFGQKRNSNFSLQHPSSTSSKEKCQDGVTRKDGKDNTSEHFSGKVEDAESSPGALPSSSL
LAKMRARNHLILPERLESDSAHQEASAPPSATTEHDDLLVEMRNFIAFQARVDGQASTRE
ILQEFECKLSASQSCVFRELLRNLCTFHRTSSGEGIWKLKPEYC
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgcaagaatcccccactcaagccaagctcaggagcaagactgtctacaaagt
cagtgtgtcagtgataaacaagaaatgacaataaaacgagaagatgacggcaatgcagag
gtggaggaaaacctcccctcttgttcctctgccagcggaccatccacttctgccgagggc
tgttcatcagaagttctgaggagagggccagccctgctgcacatcaacagacatcagata
cagacggtggagctgagtgcgcaggctcttgaactgcaggggttgggtgtggatgtgtat
gaccaggacgtgctggaacagggtgtgcttcggcaggtggacagcgccattcatgaggcc
agccgtgcggcccaacttgctgatgcagagaaagagtatcgctcagtcctggatgacctc
acgtcatgtaggacatccctaaggcaaatcaataaaattattgaacaacttagccctcaa
gctgccaccaacagagacgtcaacaggaaactagattctgtaaaacgacagaaatataat
aaggaacaacagttaaagaagatcacggcaaaacaaaaacgtctccaggccatccttgga
ggagcagaggtacaagttgaaatagatcatgctggtctggaggaagaggatacagaaccg
gggccatcctgtctcggcagcatgctcatgcctgtccaggaggctgcttgggaagagctc
atccgcactggccagatgacaccttttggaacccagatccctcagaaacaggagaaaaag
cctagaaaactaatgctcgatgaagcatcaggctttgaaaagtatttggcagatcaagca
aaattgtcttttgaaaggaagaagcaagcttgtaataaaagagcagctaggaaaactgcg
gcctcgggcacctctgagctgagcgcaacactcagtgaaaacaaaccaagtgagcgaagc
aaagttctctcgaaagcagataagcgcttgaggaagcacatcaagaagctgcagaaaagg
gctcttcatttccaagggaaagtgggcttgccgaaaggaaagaagcctttggagtctgac
gtgaggccgaaggcagagggcacctctgagagcgaagagtccgaatacttccccacggag
gaggagcaggaggaggcagagggggctgagctgaccggagaaggccctgactccctgctg
aaacctgtgctcaagcaccggaagcggcagaaaaaagtcacggtgcaggagatgggggat
gacttctttccaagttctggggaagaagcagaagccacctgtggaggaggaggtcggaaa
gtagtgagatgccgagatgatggagatgaagattattataagcagcggctaaggagatgg
aataagctgaggctgcgggacaaagagaagtgtctgaagcttgaaggcgattctgaggag
agcgatgccgagtttgacgattttaaaatcccgggttttctgttcaaaaaactttttaag
taccagcagacaggtgttaggtggctgtgggaattgcactgccagcaggcaggaggaatt
ctgggagatgaaatgggattgggcaagaccatccagataattgccttcttggcaggtctg
agctacagcaagatcaggactcgtggttcaaattacaggttcaaggggttgggtccgact
ataattgtctgtccaacgacagtgatgcatcagtgggtgaaggaatttcacacgtggtgg
cctccgttcagagtggcaattctgcatgaaactggctcttacactcacaaaaaggagaaa
ctaattcgagatattgctcattgtcatggcattttgatcacttcttactcctacattcgg
ctgatgcaagatgacattagcaggcatgactggcactatgtgatattggatgaggggcac
aaaattcgaaatccaaatgctgctgtcacccttgcttgcaaacagttccgcacccctcat
cgcatcatcttgtccggctcaccaatgcaaaataacctccgggagctgtggtcgctcttt
gacttcatcttcccaggaaagttaggcacgttgcccgtgttcatggagcagttctcggtt
cctatcaccatggggggatattcaaatgcctccccagtacaggttaaaactgcttataaa
tgtgcatgtgtcttacgagataccataaatccatacctactgcggagaatgaagtcagat
gtcaaaatgagcctttctttgccagataaaaatgaacaggtcctattttgccgtcttaca
gaggagcaacttaaagtctaccaaaattttattgattccaaagaagtttacagaattctt
aatggagatatgcagattttctctggacttgtagccctaagaaaaatctgcaaccaccct
gatctcttttctggaggccccaagaatctcagaggtattccagatgaggaactagaagaa
gatcagtttggatactggaaacgttctgggaaaatgatagtagttgagtccttgttgaaa
atatggcacaaacaaggtcaacgagtattgctattttcgcagtcaagacaaatgttggac
atacttgaagtattccttagagcccaaaagtattcttacctcaagatggatggtaccact
gcaatagcttcaagacaaccactgattacaagatacaacgaggacacatctatatttgtg
tttcttctgaccactcgggtgggtggcataggagtcaacctgacgggggcaaacagagtc
atcatctatgatcctgactggaacccaagtacagacacacaggcccgggagcgagcctgg
aggatcggccagaagaagcaagtgacggtgtataggctgctgactgcaggcaccatcgaa
gaaaagatttaccaccgacaaattttcaagcagtttttgacaaatagagtgctgaaagat
ccgaagcaaaggcgatttttcaagtccaacgatctttatgagctgttcactctgacaagc
cccgatgcatcccagagcactgaaacaagtgctatttttgcaggaactggttcagatgtt
cagactcccaaacgccttttaaaaagaaaacttctgccagcctttggaacagaccctaat
gtttcaatatgcaaaaagtgccctgattctaatgcatctgcaaatgatgccacatcatct
gaagagaagtctacagcaacaggagctgaagtaaatgcagtaacatctgatcaagtaaca
tctgatcctttgaaagatgcccctcgaacgcctagagatctgactggtggtgatgggcct
ggagaagaggtgagtgcagtgtctagaccagaggagtcatcagtgattagtggacatggg
gaatgttcagattctccaggaatcagcaaaatggatggactgtctagtgaagaaagcatc
catgaaaaacaaggtctttctgacaaaagagaaagctgccaggctgcaacagaccctctt
cgggagaataagcaaacggaaaataatttttataagcacaagtctaaaacaaaacatagt
gcaccagaagaagagaccctggagcaccatcgcaggctgaagcaaaagcctaagaactct
aagcatcgcagagatgccaagtttgaaggaactcgaattccacacctcgtgaagaaaagg
cggtaccagaagcaagacagtgaaaatgagaatgagaccagccagcagagcaatgacgat
tatgtcttggaaaagcttttcaaaaagtcagttggtgtgcacagtgtcatgaaacacgat
gccatcatagatggggccaatccagattatgtgctggtggaggcagaggccaaccgagtg
gcccaggacgccctgaaggcgctgaggctctctcgtcaacgctgtctgggagcagtgtcc
ggtgttcccacctggacaggccatcggggggtttctggtgcaccagcaggaataaagagt
agatttggtcagaaaaggaattccaacttctctctgcagcatccttcttcaacatcttca
aaggagaaatgccaggacggcgtcacgagaaaggatggaaaggataatacttctgagcac
ttcagtggaaaagtggaagatgcagaatcttcacccggggccctcccttcgtcttcactg
ttggctaaaatgagagctaggaaccacctgattttgccagagcgactggaaagtgacagt
gcgcaccaagaggcatccgctccgccatctgccaccacggaacacgatgatctgctggtg
gaaatgagaaacttcattgcttttcaggcccgtgttgatggccaggccagcactcgggag
atcctgcaggagttcgagtgcaagttatcagcctcacagtcttgtgtctttcgagaacta
ttgagaaatctgtgcacttttcataggacttctagtggtgaaggaatttggaaactcaag
ccagaatactgctga
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integrated database retrieval system
