KEGG   Lynx rufus (bobcat): 124507031
Entry
124507031         CDS       T08475                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
lruf  Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lruf03036]
    124507031
   03400 DNA repair and recombination proteins [BR:lruf03400]
    124507031
Chromosome and associated proteins [BR:lruf03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    124507031
DNA repair and recombination proteins [BR:lruf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     124507031
SSDB
Motif
Pfam: MMS19_C MMS19_N RTP1_C1 INTS7_N HEAT TOR1L1_N HEAT_2 Dopey_N HEAT_EZ
Other DBs
NCBI-GeneID: 124507031
NCBI-ProteinID: XP_046929192
LinkDB
Position
Unknown
AA seq 1030 aa
MAAAAALEAVAPTGALWGLVQDFVMGQQEGPADQVAADVKSGSYTVLQVVEALGSSLENP
EPRTRARGIQLLSQVLLQCHSLLLEKEVVHLILFYENRLKDHHFVIPSVLQGLRALSLCV
ALPPGLAVSVLKAIFQEVHVQSLPQVDRHTVYSIITNFMRTREEELKGLGADFTFGFIQV
MDGEKDPRNLLVAFRIVHDLISRDYSLGPFVEELFEVTSCYFPIDFTPPPNDPHGIQRED
LILSLRAVLASTPRFAEFLLPLLIEKVDSEILSAKLDSLQTLNACCAVYGQKELKDFLPS
LWASIRREVFQTASERVEADGLAALHSLTACLSRSVLRADAEDLLDSFLSNILQDCRHHL
CEPDMKLVWPSAKLLQAAAGASARACDHITSNVLPLLLEQFHKHSQSNQRRTILEMILGF
LKLHQKWSYEDKDERPLNGFKDQLCSLVFMALTDPSAQLQLVGIRTLTVLGAQPDLLSSG
DLELAVGHLYRLSFLEEDSQSCRVAALEASGALATLYPVAFSSHLVPKLAEELGRGELDL
ARGDEPAKCSRHLRCLQALSAISTHPSIVKETLPLLLQHLCQMNKGYMVAGTSEVIAVCQ
SLQRVAEKCQQDLESCWYFHQTAVPCLLALAVQASMPEKEHSVLRKVLLEDEVLAAMVSV
IGTATTHLSPDLAAQSVAHIVPLFLDGNVSFLPENSFPCRFQPFQDGCSGQRRLVALLMA
FVCSLPRNVEIPQLNQLMRELVELSCCPSCPSSSTAAAKCFAGLLNKLPAGQQLDEFLQL
AVDKVEAGLSPGPYRSQAFTLLLWVTKALVLRYHPLSSCLTDRLMGLLGDPELGPAAADG
FSLLMSDCTDVLTRAGHAEVRIMFRQRFFTDNVPALVQGFHAASQDVKPNYLKGLSHVLN
RLPKPVLLPELPTLLSLLLEALSCSDCVVQLSTLSCLQPLLLEAPQVMSLHVDTLVTKFL
NLSSSPSMAVRIAALQCMHALTRLPTPVLLPYKPQVIRALAKPLDDKKRLVRKEAVSARG
EWFLLGSPGS
NT seq 3093 nt   +upstreamnt  +downstreamnt
atggccgccgccgccgctctggaggcggtggcgcctacgggcgccctgtggggcctcgtg
caagacttcgtcatgggtcagcaggagggcccggctgaccaagtagctgcagatgtgaaa
tctgggagctatacagtgttacaagtggtggaagcccttgggtcatctctagagaatcca
gaaccccgaactcgggcacgaggaatccaacttctgtcacaggtgctactccagtgtcac
tccttgctcctggagaaggaagtggtccacctgatcctattctatgagaaccggctgaag
gatcatcattttgtgatcccatctgtcctgcaaggtttgagggcacttagtctgtgtgtg
gccctgcccccagggctggctgtctctgtacttaaagccatcttccaggaggtccacgtc
cagtccctgcctcaggtggaccgacacacagtctacagtatcatcaccaacttcatgcga
acccgggaagaagagctgaagggcctaggagctgacttcacctttggcttcatccaggtg
atggatggggaaaaggatccgcgaaatcttctggtggctttccgcatcgtccatgacctc
atctctagggactatagcctgggaccctttgtggaggagttgtttgaagtgacatcttgt
tacttccctattgattttacccctccacctaatgatccccatggtatccagagagaagac
ctcatcctgagtcttcgagctgtgctggcttctacaccgcgatttgctgagttcctgctg
cccctgctgattgagaaagtagattctgagattctgagtgccaagctggattctctgcag
actctgaatgcttgctgtgctgtgtacggacagaaggaactgaaagacttcctccccagc
ctttgggcttctatccgcagagaggtgttccagacggcaagtgagcgggtggaggcggat
ggcctggcagccctccactccctgactgcgtgtttgtctcgctctgtgctgagggctgat
gccgaggacctccttgactccttccttagcaacattctacaggactgcaggcaccatctg
tgtgaaccggacatgaaactggtgtggcctagtgccaaactattgcaggcagctgcaggt
gcatctgctcgggcctgtgaccatatcaccagcaacgtactgcctttactgctggaacag
ttccacaagcacagtcagagcaaccagcggcggacaatccttgaaatgatcctcggtttc
ttgaagctacaccagaaatggagctatgaagacaaggatgaaaggccgctgaatggcttt
aaggaccagctgtgctcactggtgttcatggctctgacagatcccagcgcccagcttcag
cttgttggcatccgtacactcacagtcttgggtgcccagccagatcttctctcttctggg
gacttggagctggcagtgggtcacctgtacagactgagcttcctggaggaggactcccag
agttgcagggtggcagcactggaagcatcgggagccctggccactctctaccctgtagcc
ttcagcagccacctagtgcccaagcttgctgaggagctgggtagaggggagttagatttg
gctagaggggatgagcctgccaaatgctcccggcatctgcgctgtctacaagccttatca
gctatatcaacacatcccagtattgtcaaggagaccctgcctctgctgctacagcatctc
tgccagatgaataaagggtatatggttgcaggaaccagtgaagttattgctgtctgtcag
agcctccagcgggtggcagaaaaatgccagcaggaccttgagagctgctggtatttccat
cagacagctgtaccttgcctgctcgccctggcggtgcaggcttccatgccagagaaggag
cactcagttctgagaaaagtactgttggaggatgaggtcttggctgccatggtgtctgtc
attggcactgccaccacccacttgagccctgacttagctgcccagagtgttgcccacatt
gtgccccttttcttggatggcaacgtctcctttctgcctgaaaacagcttcccttgcaga
ttccagccattccaggatggctgctcagggcagaggcggctggttgcattgcttatggcc
tttgtctgctccttgcctcgaaatgtggaaatccctcaactgaaccaactcatgcgggag
cttgtagagctgagctgctgccccagttgcccctcctcctccactgctgccgccaagtgc
tttgcaggactcctcaacaagctccctgcagggcaacagctagatgaattcctgcagctg
gcagtggacaaagtggaggctggcctgagccctggcccctatcgtagtcaggccttcaca
ctgcttctctgggtaacaaaggccttagtgcttagatatcatcctctcagctcatgcctt
acagaccggctcatgggcctcctgggtgatccagaactaggcccagcagcagctgatggc
ttctctctactcatgtctgactgcactgacgtgttgacccgtgctggccatgctgaagtg
cgtatcatgttccgccagcggttcttcacagataacgtgcctgctttggtccagggtttc
catgctgcttcccaagatgtgaagccaaattacctgaagggcctgtctcacgtacttaat
aggctgcctaagcctgtactcctaccagagttgcccacgctgctctccttgctgctggag
gccctgtcttgctccgactgtgtagttcagctctccaccctcagctgccttcagcctctt
ctactggaagcaccccaggtcatgagtcttcacgttgacacccttgtcaccaagtttctg
aacctcagctctagtccctccatggctgtccggattgccgcactgcagtgcatgcacgct
ctcactcgcctgcccacccctgtgctgctgccgtataaaccacaggtgatccgagcctta
gccaagcccctagatgacaagaagagactggtgcgcaaggaggcagtgtcagccagggga
gaatggtttctgctggggagccctggcagctga

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