Lynx rufus (bobcat): 124507075
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Entry
124507075 CDS
T08475
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03410
Base excision repair
lruf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124507075
03450 Non-homologous end-joining
124507075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lruf03400
]
124507075
Enzymes [BR:
lruf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124507075
DNA repair and recombination proteins [BR:
lruf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
124507075
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
124507075
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
HHH_5
BRCT_2
NTP_transf_2
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
124507075
NCBI-ProteinID:
XP_046929287
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MDPRGILKAFPKRKKIHADPSSKVLAKIPKQEDGEAGEWLSSLRAHVVPSGIGRARAELF
EKQIIQHGGQICTAQAPGVTHIVVDEGMDCERALRLLRLPRLPQGAQLVKSTWLSLCLQE
RRLVDTAGFSIYIPNRYPDQPHVSKADQDFSAPPGAHEALLRTALSPPSPPTRPVSPPKR
AEEALSTQAQPGSDDETSDGEENQVSAADLEALISGHYPTPLEGDDEPSPAPEGLDKWVC
AQPSSQKTTNHNPHITEKLEVLAKAYNVQGDKWRALGYAKAINALKSFHKPVTSYQEAFS
IPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGAKTAQMWYQQGFRTLE
DIRSQASLTTQQTIGLKHYDDFLERIPREEAAEIEQTVRESAQAFTPGLLCVACGSYRRG
KATCGDVDVLLTHPDGRSHQGVFNRLLDSLRQQGFLTDDLVSQEENGQQQKYLGVCQLPG
PGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKSMSLSEHALSTAVVRDSR
GRKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggacccaaggggcatcttgaaggcatttcccaagcggaagaaaattcacgccgatcca
tcatcaaaagtacttgcaaagattcccaagcaagaagatggagaagcaggagaatggctg
agctccctgcgggcccatgttgtgcccagtggcattgggcgagcccgggcagagctcttt
gagaagcagattatccagcacggtggccagatatgcactgcccaggccccaggcgtcact
cacattgtggtggatgaaggcatggactgtgagcgagccctccgcctccttcgactgccc
cggctgccccagggcgctcagctggtgaagtccacctggctaagcctgtgcctgcaggag
aggaggctggtggacacggcaggattcagcatctatatccctaacaggtacccggaccaa
ccacacgtcagcaaggcagaccaagacttttctgctcctcctggagcccatgaggctctg
ctcaggacagccctctctcctccctctcctcccacgaggcctgtgtctcctcccaagagg
gcagaagaggccctgagcacccaagcccagcctggctctgatgatgaaaccagtgatggg
gaagagaaccaggttagcgcagctgatctggaagcccttatcagtggccactaccccaca
ccccttgagggagatgatgaaccaagcccagcccctgagggcctggataagtgggtctgt
gcacagccttcgagccagaagacaactaaccacaacccccatatcacagagaagctggaa
gtgctggccaaagcctacaatgttcagggagacaagtggagggccctgggctatgccaag
gccatcaatgccctcaagagcttccacaagcctgtcacctcctaccaggaagccttcagt
atccccgggattggaaagcggatggccgagaaaatcatagagatcctggaaagcgggcat
ctgcggaagctggaccatatcagtgagagcgtgcctgtcttggagctcttctccaacatc
tggggagctggagctaagactgcccagatgtggtaccagcagggtttccggaccctagaa
gacatccgcagccaggcctccctgactacccagcagaccattggcctgaagcattatgat
gactttctggaacgcatacccagggaggaggctgcagagattgaacagacagtccgggaa
tcagctcaggccttcacccctgggctgctgtgtgtggcatgtggttcttaccgacgtggg
aaggcaacttgtggtgatgtggatgtgctgctcactcacccggatggccggtctcaccag
ggcgtcttcaatcgcctccttgacagccttcggcagcaagggttcctgacagatgacctg
gtgagccaggaggagaacggccagcagcagaagtacttgggtgtgtgccagctcccaggg
ccggggcggcggcaccgacgactggacatcatcgttgtgccctacagcgagtttgcctgc
gccctgctctacttcactggctctgcccacttcaaccgctccatgcgggctctggccaag
accaagagcatgagcttgtcggagcatgccctcagcaccgctgtggtccgggacagccga
ggccgcaaggtggggcctggccgagtgctgcccactcccactgagaaggatgtcttcagg
ctcttaggcctaccctaccgagagccagccgagcgggactggtga
DBGET
integrated database retrieval system